Gene detail

Detailed information of ENSQPTP00000056450.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031554188.1, tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000067006

ATTTTTATACCTTAAACTttacatattatattttattacatCTTTTATTACGATTAATCTAGAATGTCCAAAATCAAGAGAAAAGGGTACGATTTTTGGAGGAATGATTTAAAAGAGGCCAAACTAGTCGTGGCCCCAATGGTGGACCAGTCTGAGTTACCATGGAGAATGCTGAGCAGAAGACATGGTGCTCAACTGTGTTATACTCCTATGCTTCACTCTAGTTTGTTTGCAAGAGATCCTATATATAGAAAGGAATTCTTTACGACTTGTCCTGAAGATCGACCATTAATCGCTCAGtTCTGCACCAATGACCCAGAGACATTTGTGAAGGCAGCTCAGTTTTTAGAGTCTCACTGTGATGCTGTTGATCTTAATCTTGGATGTCCTCAAATAATTGCTAAGAAAGGTCATTATGGTGCTTTTTTGCAAGATGAATGGGACTTGATTTCCAAAATAGTTAGCCTTGCACATGAAAAGCTATCGATTCCAATAACTTGTAAAATAAGAGTCTTTGATGACCTTAAAAAGACAATAGAATATGCTCAGATGCTGGAGAAAGCTGGATGCCAGCTTTTGACAGTACATGGTCGGACAAGGGACCAAAAGGGACCCAAGACAGGGCTTGCAAACTGGGATTACATTAAAGCAGTCAAACAAAGTGTTTCCATCCCCGTTTTTGCCAATGGTAATATTCAGTACTTcaaagatatccaagcatgtATGGAGTATACTGGAGTGGATGGTATTATGACAGCTGAGGGTAACCTCCACAATCCTGCTCTACTTGGTGACAGGCAACCAATGGTGTGGGAGATGGCAGAAGAATATTTAGACCTTGTTGATAAGTACCCCTGTCAACTGTCAGCTGTAAGAGGTCATCTCTTCAAGCTCCATTTCTATAGCCTTTGTAAACATACTGACTTGCGAGAAGTGCTTGGAGATTGCAAATCACTTGAAGAGGTGAAAAAAGTTAATCAAGAACTTACCCAAAGGCTCAAGAAAGATGCCGAGGAAAACACTGATAAACCAGTATCATACACAGGATTACCACACTGGGTGTGCCAGCCTTATGAAAGACCAAGCCCCAAAGATAACTCATCTACAGCAAACCAAGCAAAAGAGAAAGACTCATGTGAAGGGGATAGCGAAAACAAAGTTTTGGctgaaaaaaaacttaaaaaagctctgaaaagaaagaaattgctGCTGTACAAGAGTAGTAAAGTTCCAGTTGAATGGGTATTTTGTTCTCTATGCAAGACCAACCCAATGAGTAAAAAGTGCGAATATCAATACTGCCGACACTGCTGTAAAGAAAAAACTGCGTTAGAAAAACTCGATTGTCCTTCACATCGTTTTTGGTTTCATACGGGCAAAAAAAAGAAGTTTGATAATGACGATACACATCATGAGGAAGAACAAAAAACATCCAATACACGAACCacgaacggtgagcttgctatgatagagacatgcgaATAATTATCCAAGGTGAGAGAGCTGACTGATTGGTCCTTACGGCTTCTGGCAAGAATTTCAAGGTCATTAAGTACTCGTCACAACAGTAATAGTTTATCATGTGTCCAAGACTTGGTCCTTGATCCATTCTTAGGAGCTCCATCGCTTTATTTTTGGCAAAGTGTTTGTTTTCAAGTTCTTTGCCTATTCCCCATTGAGCGAGTAAGCGCATGAACGGGTAAATTCGCTCAGAGGATGAACACCCGGTTTTTGCAGCTATGTCTTGGATGCTAACAGACGGCTCGTCCGTGTTGCAGAGTAGATCAGGAATCTTGAAGCCCACGACAAGACTCAAACATCTGTTCAACCATAAACCATGAAACATCGAGAAAATGACATTTTCTTCTTGGCTTATCGCAGATTCTGCCATGTTTAGTTGGTACGTAAGAGCCTAGTCAGGAAAATGCGTTAGCTATATCTTTGTTAAATATGGGAGTGACTGTGAGCTATGAGACGTGATTGAGGGACCGTGAATAAATATTCTTAACAAACTtaaaggccccgtccacactatgcttaataaatttgaatccgaatttttatttatttggttagacctaccgtccacactagtccgggcgaatccggaacaattcttcaccgaaaacgatttttttcgaatacggtctccagagtggaacaatttgaaaacgccggctagccgtattagtgtggacggaggaCATTCCGTATCCGAAATTGTTatgggaacatggcgggaaggctaaaaaaTCACCGCAGGCTCGATTTAAActtcgatgcacatgctcagatgtgcaatgaagcgtttttgccgcctcttTGACTATTGTGGACacgaaacattttatccgttttcatgtgtggacggaaaactttttttttcggtttcggtgtgaaagttgcggattcaaatttatccggcatagtgtggacggggccttac

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P1R4	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Homo sapiens OX=9606 GN=DUS1L PE=1 SV=1
Q8C2P3	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Mus musculus OX=10090 GN=Dus1l PE=2 SV=1
Q8K582	tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like OS=Rattus norvegicus OX=10116 GN=Dus1l PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001339 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01207 all species →	Dus	Dihydrouridine synthase (Dus)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018517 all species →	Conserved_site	tRNA-dihydrouridine synthase, conserved site	Interproscan
IPR013785 all species →	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR035587 all species →	Domain	DUS-like, FMN-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11082 all species →	TRNA-DIHYDROURIDINE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008033 all species →	Biological Process	tRNA processing	Interproscan
GO:0017150 all species →	Molecular Function	tRNA dihydrouridine synthase activity	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05542	DUS1; tRNA-dihydrouridine synthase 1	EC:1.3.1.88	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.