Gene detail

Detailed information of ENSQPTP00000056564.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031558613.1, myocardin-related transcription factor A-like isoform X3 [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000067130

ATGGATTTGCAGACTGACAAGGACGGTAACCTTTCTAGGGTTGCCAGTTCTGAAATAGCTTCGGCTGTAAGCCACCAACAGCTCATGAATTACCGACAAGCTTTGGAGAGGAAACTTCAACAACGAACTCCTCGCGAACAACTGATAGACCAAGGCATCATGCCAGCTTTGGCTACTGCTCCTTCTTTGTTGTCCCAGAAGACCAAATTAGAGCGAGCAAAGACAGGAGATTACTTACAAAAGAAAATACGAGTTCGTCCCAATCGGGCTCAGCTGGTGCAGAGGCATATTCTAAATGATGTGTCCCAGGCAATTGACCCATCgttgttagccaatcagatgaAACTCAAAAGAAAGAAGCTTGAAGATGACTTAAATGAAAGGCTTGCTATTAGACCTGGACCTTTAGAGCTTGTAAAGGACAATATATTAGAACAAGGAACTGCTGTTGGGCTTGCAATACAAGAAGGAAACATAGACTATACAGAGACAGCTAAATCACATTTACTTGAACCAATCTCTCCAGAGTCATTTGATGGCTCTCCTGAACCTTCTCCTGATGGAAACTCTCTCATTACTCAAATCCCACCAACTTCTATAGCAGAATTCTTCAACAAAAATGCATCTAATATAACGTTGTCTCAAGGATCTCAGCCTTTGGATGGCAAACCTTATGAAGAATCACAAAGTTTAAAGAAAGAGGGAAggtcaagaaaaaaatcccCCAAGCCAAAGTTTAAAAAGTACAAATATCATGAATACAGACCTCCAAATGGTGAACTACAAAAAAGTAATTTGCCTATGGATTCACCCTATGCATTAATGCTCCAACAACAACAGCTTTACTTGCAGCTACAAGTATTGTATCAGAACTATCCTCAATTTGTAAGTCTGCCATCAATACCAGAAAATACAGCCAAAATAtcaaacaataacaacaatgtAGATGATGAGAAGCCAGTGAAAATAGAAGACATGCGTGTTGTGGATATGAGAAAAGAACTCAAGATGAGGGGATTACCTGTTTCTGGATCCAAAACAGATTTAATAGAAAGGTTAAAGgcctctctctctttttctggTGACCAAGGAGTAAATTCCACAGAGAATTTATCAAATGACTCAATGGAAAGCAACCAAGGTTCTCTAGTGAGTTCTATATCATCTGGTTCTCCGATCCCTGTATCTAGTGTAACTACAATAGTCAATGGACACACTAAGTTAGGGAGGTCAAATTCTCTTCCAGCACATGAAGCCAGACTTCAACAAGTTCAAATGCAGTTGATGGCAAACTGCAAGAAATTACAGACCCAGCTTCCTCCAGAGGTACAACAACAGCTACAGCATCTACAGTACCTTAACCTGCAAACACATTTGCAACAGTTACGTGTGCAACCTCATACCAATATTCAACCAAAACCAATACAGTTTAATGTGCAGACAAGCAGTAGTCAACAGCCTGTGTCTGTTGCAAATCAACATCAGCAAGTATCAACAATGGCACCTATCAAAAAAGAACTAAATGTTACTGATAGTTGTGTTTTTAGTCAGCAACAAATCCAGCAAAGTTCGGGACAGGTGTTTACTCACTCAACGACTACTAGTGATGCTCAAGCACCATTCTTTTCACACCCTTTGTCAACTAATCTGCCAAGCCCTGTGATAACTATGACACAGGCTACACCATCTCTTATCACAAACAGTGCTAACTTAGAACAGCAAAAACATATGCAAAACTTTTCACCTGCCCAGTCTCAGGGGTTACTGCATCTTAAGGCAGAAgcaaataaattgaatattGCAGCTAGTCATAGTGAACCAGATCTTAGTCATATGGATAAACTTGACTTCAGTGGTTGGAATCaaggaatgaaacatttaACACATGATAACAAACCTATTTCACCTTCTCATGGTTCTCCTTGTCAAACGCCAAACATGTTTGCACCACCTGCGCAACATCACCAGGAACACAAATCCAGGCCAATAGAGTCTGTTGAATACAACCCAGCAAGAGAAAAACCTGATAGTATGCAAAGGTCATATTCTGAACACACACAAGAAGATGGTGGTATCATGATGCATGCTGTCGGACAAGATGCAGAGAAGCAGCGTTCCATGTCTGAACCTGCTAACCCATTTGTCCACAGAAGATCATGCTCACTCCCTTCAGGCCAACTGTTCTTTGATCATCTCAACCCACCACCAAGTTATGAGGCCCACATGGCAGCCCAGATGCATAGAAAACTGAGTCAGGAACACATCTATCAACCACAGCAACACACTGTTCCTGCTAAAACTGAAGATGTGGATCAAGGAATGGATGCCCAACAGGATAGAGAGTTAACCCAAGAGTTACAAAGGGCCTGTCAACATTCCTTATTAGAGGATGTGggatTAAGaacaatgatattttttattcatgtttATCTATTATCTTCATTTTTCTATACTTCAAAGGTCATGATGAAGCAAGATTTGGGTGTAGATAATGATGAAATCCTGGAAATTCTAGGAGCTTCTGTTGGTAGTTCTGTCGGTTCTCCTGTTCATTCGACTGCAAACAAAGTCATAATTAGTTCACCACCCAATCAGCTGTCTCCTCAAAGGTTTGGCCAAGCACCTCACGTGCAAAACAATTCTAACGTCTCCAAGTCTCCAAGTGCAAACTTTTTGGGTGTTCATAACTCACCAAGCAACAACCAACAATTTCAACGAAGATTGTCAAGAAGCTGTGAAGATGTAACAGGTTTAACAAGTTATAACAATCCTAATAATGTCAATCCTAAGCATGGTATGCAGTCAAGTGCAGAGGGTAGCCTTGCTGATTTGGATTCTATCATAATGAGTCCAGCATCACCAATGAGAATAGATTCTGATACAGACCACCTTATGTCAATGTCCAATAGTATACCCATACCCAGTAATTATGTTCATAAAAGTGACACTTTGAGCTGGTTGGATTTGAGTAATTCACCTATTATGACATCTCCTACTGGAGCTGCCACAGAAGTGACTTATATGAATAGAGCTTCACCACCACCTACACTGTATGGAGCATCACCCTCTCTTCATCATGAACAATTTCCACTGTCTCTCTTTGAACTTGATGCTACCGGGTCTAATAACTTGTCTCATGATTTCTCAGAAGCTATGGATTTCTGTGTATAG

Transcript

ENSQPTT00000067130

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7YR76	Myocardin OS=Sus scrofa OX=9823 GN=MYOCD PE=2 SV=1
Q969V6	Myocardin-related transcription factor A OS=Homo sapiens OX=9606 GN=MRTFA PE=1 SV=1
Q8AYC2	Myocardin-related transcription factor A OS=Xenopus laevis OX=8355 GN=mrtfa PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004833 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02037 all species →	SAP	SAP domain	Domain	Interproscan
PF02755 all species →	RPEL	RPEL repeat	Disordered	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003034 all species →	Domain	SAP domain	Interproscan
IPR004018 all species →	Repeat	RPEL repeat	Interproscan
IPR043451 all species →	Family	Myocardin-like	Interproscan
IPR036361 all species →	Homologous_superfamily	SAP domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22793 all species →	MYOCARDIN-RELATED TRANSCRIPTION FACTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003713 all species →	Molecular Function	transcription coactivator activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22525	MKL; MKL/myocardin-like protein	-	Transcription	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.