Detailed information of ENSQPTP00000058418.1 in Actinia mediterranea

Genomic Location: :...
NR annotation: XP_031570149.1, cadherin EGF LAG seven-pass G-type receptor 1-like isoform X2 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9V5N8Protocadherin-like wing polarity protein stan OS=Drosophila melanogaster OX=7227 GN=stan PE=1 SV=4
Q9Y5H2Protocadherin gamma-A11 OS=Homo sapiens OX=9606 GN=PCDHGA11 PE=1 SV=1
Q5DRC0Protocadherin gamma-A11 OS=Pan troglodytes OX=9598 GN=PCDHGA11 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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