Gene detail

Detailed information of ENSQPTP00000060002.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031556729.1, prolow-density lipoprotein receptor-related protein 1-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000070853

ATGAGGGCTTTTAAACTGTTAACGGTCGTATTTGGGTCGTTACTGCTCTTTGAAGGTTATCGTACATTGGCGGTTAATAACTGTACCTGGGGGCAGTTTCAATGTGATAACCGAAGATGCATCAAGGTTACCTTCAGATGTGACAAGGATAATGACTGCGGTGATAATTCAGATGAGAAGGGGTGTGGAAATGTGTGCACAAACCATTACTTCAGGTGTGGGAATCGTAAATGTATCTCACGTATGCATATGTGTGATGGAGACAATGACTGCGGAGATGGTTCTGATGAAACACATTACCTTTGTGGATCAGGGTCTGCACCGCTGACATGTATAAACTGTAATGCCGCGGGCTCATCAAACTGTTCAAATGAAGTACAGTGTTCTCGTAGATACACTAGATGTGCTCGTTTTGCTTATGTGAGCAACGACACAAACATCATCGAGTCAATTTGCGTCACCAAGTCTGACTGTACTCCTGAAGGAATCAGAAAACAGTGTCTAAAAAGGGGGgATGAGTGTAAAATGCAATGCTGTAAAAGAAACAGATGCAATAAAGCAGAATCATTTGACAACAGTATTTggagcccacacTTAACTTGCTATCAATGCAATATCCATAACTGGCAAAGCTGCAATACTAAGGTCACGTGCCCAGGAAACGAAGGATATGACAGATGTTTTAGGATGTCGTACACTCGTATCGAGTCTGGGAAAGAGTATCCTGTTATGAGGACAGGATGTGCGACTCAAAGTAACTGTACTGGAGTAAACACCCTATGTTCAGGTCATGATGGGTCCAATTGCAAACTCGAATGTTGTCATAACTCGAGCTGCAACGTTCCGAAAATCGATGAAACATCATCTAAGTCCAACATCAAGTGCTACAAATGCTCCTCTAAGAGGTCTCTCCAAGACTGCAAAGACAGAAAAATTTTACAAACTTGCAGCGATAACGAAGATCGTTGCTATGATGCACAGGTTATCACGGACCACAAGAACGATGAAGGAGTTCCACGCATGTTCTATAAGGGGTGTACGCTGGCCAATAAATGCAATAGCACGACTCTTGATGTCTGTAAACGTCACTTCAAGTCAACTAGTTGCACTGTTAAATGCTGCACTGGAGATGGATGTAATGCAGGCTCATCTCTTCTGGTCAGCAGATTTGTTCTCATGGCATGCGTGTCGATTTATGTATATTTATGTATTGGGCTATCTCAAACTAATTTTCTAGGGGACAATGGAATACATTTTGAAAGATATTTGGCAACAGCCACCAACACTTGTACTTGGGGATTCTATATGTGTGCTAGTAACTCCCAGTGCATATCAAGTAGAAACAAATGTGACGGTACAACCCAGTGTACTTAtggagaagatgaaagaaactGCCCGACAAGGTGTTATGGAAGTAACTTCAGGTGCAGCAATAATAACTGCATATCAAGGAGTTCCTTATGCAACGGTGTCAATAACTGCGGTGACGGGTCCGATGAATCCACCGCTCTTTGCGGTGGTGCAGCATTCCAAGTGAGGCTGGTGGGAGGAAGATCGTCAAACGAAGGACGAGTGGAGGTTTACTATCCCCCAACACGTACATGGGGTACAGTCTGTGATGACAATTGGGATTTAAACGATGCCAAGGTCGTTTGTCGTCAACTTGGTTTGCCCCGCGCTACACAGGCTGTAATTGGGGCACGTTTTGGTCAAGGAACAGGCCCTATTCTGCTCGACGAGGTACAATGTACAGGCTCAGAGTTAACATTGTCAAGATGTTCATCTGGAGGATGGAAAAACCATAACTGTGGTCATAGTGAAGATGCTGGTGTTATATGTGGCGGTATgctcttaacatgtgataatCTCTATGTATCATATCAACATTTCTGTCATAATTATCGTACTATCATTGTaccttcatcatcacatcaaaaTATGGTATGTAATTCATTTCAATGGAGATGTGATGGCAAAAGTGACTGTTCCAACGGAGAAGACGAACGAGGCTGTCGCACATTTTGTCCCGACCGCACGGGTAATTTCAGGTGCAACAATTACAAGTGCATTACAAGGAGTTATGTTTgcgatggtgataatgactGTGGTGACTATTCTGATGAATCGAATTACCTATGCGGATCACGAAGTACTAGTGCATTACGATGTTACAGCTGCAGCAGTGTATCATCAAGTAGGTGCTCCACTACAAGGAGCTGCTCATCTGGTCAAAGGTACTGCTACAGGAAAACCTATGACACGACTTTTGCGAGCTCAACAAGTCGCGTTACAGATGCTGGATGCCGATCAAGTTGTACTTCGTCTTATAGAGAGAGTGCTTGTAGAAACCAAAGAAACTGTCAGATGACATGCTGCAGTACTTCCTCGTGCAACAGCGACTCAAGTGGTGGAACAAGCTCTCCCTATCCCAGTTGCTACACTTGTGTGTCGACTTCATCGTACCAAGAATGCCAAAACAAAGCCACTTTAACTAGATGTAGTTCTACCACTTCCTCTTGTTACAAAATGGACTACAAGATGTCCTCGTCATATGGCAACCTTAGTCATTACGGTAAAGGCTGCACATATGAATCAAGTTCCTGCAGCCAAATGCGATCCACGTATTGCAACAGTCGAGTAACGGATACGTGCAATGTTTACTGCTGTTCTGGTTCCGGCTGTAATGCAGGCTCAGCTCAGCGGTTCAGCGTTGTGGCACTCATGACATGCGCTATTGCGTTTTTCATTTCTCAAAATGTCCGTTTCTTGCCGTGA

Transcript

ENSQPTT00000070853

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G3V801	Neurotrypsin OS=Rattus norvegicus OX=10116 GN=Prss12 PE=1 SV=1
O08762	Neurotrypsin OS=Mus musculus OX=10090 GN=Prss12 PE=1 SV=1
Q95218	Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000099 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00530 all species →	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan
PF00057 all species →	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF00021 all species →	UPAR_LY6	u-PAR/Ly-6 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023415 all species →	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR036055 all species →	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR001190 all species →	Domain	SRCR domain	Interproscan
IPR002172 all species →	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR050685 all species →	Family	Low-density lipoprotein receptor	Interproscan
IPR018363 all species →	Conserved_site	CD59 antigen, conserved site	Interproscan
IPR045860 all species →	Homologous_superfamily	Snake toxin-like superfamily	Interproscan
IPR036772 all species →	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR016054 all species →	Domain	Ly-6 antigen/uPA receptor-like	Interproscan
IPR017448 all species →	Domain	SRCR-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24270 all species →	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000060002.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.