Detailed information of ENSQPTP00000060040.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031570108.1, late histone H1-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6NVM0Histone H1.0 OS=Xenopus tropicalis OX=8364 GN=h1-0 PE=2 SV=1
P22845Histone H1.0-A OS=Xenopus laevis OX=8355 GN=h1-0-a PE=2 SV=3
P22844Histone H1.0-B OS=Xenopus laevis OX=8355 GN=h1-0-b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000413 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00538
all species →		Linker_histonelinker histone H1 and H5 familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005819
all species →		FamilyLinker histone H1/H5Interproscan
IPR005818
all species →		DomainLinker histone H1/H5, domain H15Interproscan
IPR036390
all species →		Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388
all species →		Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11467
all species →		HISTONE H1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000786
all species →		Cellular ComponentnucleosomeInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006334
all species →		Biological Processnucleosome assemblyInterproscan
GO:0030527
all species →		Molecular Functionstructural constituent of chromatinInterproscan
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0030261
all species →		Biological Processchromosome condensationInterproscan
GO:0031492
all species →		Molecular Functionnucleosomal DNA bindingInterproscan
GO:0045910
all species →		Biological Processnegative regulation of DNA recombinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSQPTP00000060040.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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