Gene detail

Detailed information of ENSQPTP00000060136.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_028516886.1, sodium- and chloride-dependent transporter XTRP3 [Exaiptasia diaphana]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000070991

gtcaagcgaattcgggatagATCACTCAACGCATTAACCTACTACCCACCATGCGATCTATCTACGAGTAGCTACAGTGGCATGGCAATATCAAACAACCACTTATCAGTAGAAGTCCCGCGCAGACCGAGCAGTGGAACACATTCAAACCAAGGCACCTCTTCCAATTTGAATTTCCACGGGTCGAACGACTCTCGCCTTGAGGTGACAGAACTATCTGGAACAATAACCCAGAATGGGTTTTGTGTTGATCAAATCCATTATAGACCCAGGAGAGAGAGGTGGAAAAATCGTACTGAGTTTATATTGACTTTGATTGGGTATACTATTGGTCTGGGGAATGTATGGAAGTTCCCTCATTTGTGCCACAAGAATGGTGGAGCGTCATTTCTTATTCCTTATGGGATAATGTTGGCAGTCGAAGGAATTCCCCTATACTACATGGAGCTTTGTATCGGCCAAAGAATGCGCAAGGGTTCCATAGGCGTATGGAACGAAATTTCCCCCTACCTAGGAGGTCTAGGGATAGCTTCAGTCGTTGTCTGTTTCTTGGTGTGTCTATACTATAACGTCATCATCGCgtggtgtattttttacttcGTACAATCGTTTCAATCGCCTTTACCTTGGGCTTCCTGTCCcacacatgacgtcatcgtggGTAATATAACAAAAAACGTGCCGATTCCTTCGTGCGACGTGCGAAAACCAACCGAATATTTCTGGTATCAGACAACGCTTGGAATAACGAATAATATCGAGGATACAGGTGGCATGAATTGGAAGCTGTGGGGATGTCTGGTAGCTACATGGGTACTTTGTTGGATCTGTATGATGAAGGGAATTAAGGTCACAGGAAAGATTGTCTATCTTACTGCTACCCTACCCTTAGTGCTTCTgatcatcttcttctttcgTGGAGTCCATCTTGATGGATACCAAGATGGACTGAGAATGCTGTTCGTACCTGAGTTTGCACGTCTCTCAGATCCTCTAGTATGGTTAGATGCAGCAGTACAAATATTCTACTCTCTAGGAGTGGCCTATGGATCACTCATCGCATTCTCAAGCTACAACCCACTCAAGAACGACTCCACTAAAGACGCTATAACCGTATGTTTTATCAACTGCGCTGTCTCCATCTACGCTAGCGTCGTGGTCTTCTGTTTTATTGGATTTCAGGCGCAGAATAGAATGGATGATTGTCTTGAAAACAAACGCGAGCAAGTATTACGGATATTGAACGACACGGGGTTAATCAGCCAAGGTCTTCCAGACTGGAAATATGTAGATATGGGAGAGATTAGTGAGAATATTCAGAATGCCTCGATAATAGCCAATGAAACGATTATCACCTGTAACAAGACACAGTTCCTTGAAATGTCTAGTGGGATTGGCTTAGCCTTTATAGTCTTCACGGACGTCATCACCAAGATGCCATATGCACCGATATGGGCCGTAATGTTCTTCCTCATGCTCATCACTGTTGGAATTAATACCCAGTTTGGAATGTTAGAGGGTGTGGTCACTCCTATCTCGGATATGAGGCTGCTACCCACATGGaagaaaaaacacatttcagGTGCTATTTGTTTCATTCTGTGTATTCTGGGATTCACCATGGTAACATATTCTGGATCTTACTGGTTCGAGTTGATCGATGCTTACTGCTCGGGAATACCTCTGCTGATCATCGCCTTGGTTGAATGTATAGCGATATCATTTATCTATGGCATTGACAGGTTTAGTGAGGATATTCACTACATGACCAACAAGCCGCCTCGGTTTATATGGAAGTGGTGTTGGAAAGTCATCTCTCCTCTGGCTATTTTAGCAGTGCTAAGCATGAGTATTAAAGGAATGTCTGAAACCACTCCATCTTATTCCATATGGGACGCCGAAAAGCGAACCAATACTAGGGTACCCCTCCCCGCGTGGGGCGTATTTATCGCAATCATGTTGACCATGGCGTCGATATTCTTCATCCCTGCCGTCGCGTTTCTCAAATACTACGGCTTCATCGGGCTTACCAACACCGAACTACCATCCGTCGTTCTTTCTCGTAAAACCCAATCAGCTGAGCTCCAACCGCTTTACCGCGAGACCCCTAAGAGCAAACGTAGAAAGAAGGAAccgaaaaaagccaaaacgcTGTCAAGAAACGCTTCTTACATGAGCAACCATAGACCGAAAGAACGAAACGAACATTCCAGGCCCGTGGCAAATGGAAGGGTGCCTACTATTAGGACGGAGAATGGAGAGGCGTGTCACGTGATCAACAATCATAATAATGGCAGTATTGGATTCGTATGA

Transcript

ENSQPTT00000070991

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q695T7	Sodium-dependent neutral amino acid transporter B(0)AT1 OS=Homo sapiens OX=9606 GN=SLC6A19 PE=1 SV=1
Q5R6J1	Sodium-dependent neutral amino acid transporter B(0)AT1 OS=Pongo abelii OX=9601 GN=SLC6A19 PE=2 SV=1
Q9D687	Sodium-dependent neutral amino acid transporter B(0)AT1 OS=Mus musculus OX=10090 GN=Slc6a19 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000304 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00209 all species →	SNF	Sodium:neurotransmitter symporter family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000175 all species →	Family	Sodium:neurotransmitter symporter	Interproscan
IPR037272 all species →	Homologous_superfamily	Sodium:neurotransmitter symporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11616 all species →	SODIUM/CHLORIDE DEPENDENT TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0035725 all species →	Biological Process	sodium ion transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05048	SLC6A15S; solute carrier family 6 (neurotransmitter transporter, amino acid/orphan) member 15/16/17/18/20	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.