Gene detail

Detailed information of ENSQPTP00000060761.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000071644

TTCTGCAATAATGCACTAAAAGAATAcaacaaggccaaagtatactatgagagagcactgtccattcgcgagaaaggagacaatgaaaatgattcacaactggctactacgctagataaccttggtttctgccatactGCACTAAACGAATACGAAAAGGCCAAATTATACTAtaagagagcactgtccattcgcgagagaggagacaatgaaagtgattcacaactggctactacgctaaataaccttggtctcTGCCATAgaaaactagaacaatacgataaGGCAAAAGCGTACTATGAGAGagtactgtccattcaagaaaaagtagaagaagaaaatgattcacaactggctactacgctaaataaccttggtctcTGCCAGagtaaactaaaagaatacgacaaggctaaagcgtactatgagagagcactgtccatttacgagaaaggagacgatgaaaatgattcacaactggctactacgctagaTAACCTTGGTCTCTGTCATCTagaactagaacaatacgataaAGCTAAAGCGTACTTTGAGAGAGTACTGTCgattcaagaaaaagaagacgatggaaatgattcacaactggctacaacgctaaataaccttggtctcTGCCATCgaaaactagaacaatacgataaGGCTAAAGCGTACTTTGAGAGagtactgtccattcaagaaaaagaagacgatggaaatgattcacaactggctactacgctagaTAACCTTGGTCTCTGCAATCgaaaactagaacaatacgacaagGCTAAAGCATACcttgagagagcactgtcatTTCGCGAGCTCGAGAGaggagacaatggaaatgattcacaactggctactacgctagaTAACCTTGGTCTCTGTCATCTAGAATTAGAACAATACGATAAGGCTAAAGCGTACTTTGAGAGGTCACTGTCTATTCAAGAGAaaagagacaatgaaaatgattcacaactggctactacgctaaataaccttggtctcTTCCATAgaaaactagaacaatacgataaGgctaaagcgtactatgagagagcactgtccatttacgagaaaggaatcaatgaaaatgatccacaacTGTCTAATACACTAAacaaccttggtttctgctatattaaactaaaagaatacgacaatgCGAAAGTATACTTGAAGaaagcactgtccattcgcgagagaGGAAGCGATGAAAATGGTTCACAACTGGCTAATACGCtagataaccttggtttctgccatagtGAACTAAAGAAATACGACAAGGCTAAAGAGTGCtgtgagagagcactgtctatgcaagagaaagaagagaaaggaggcaatgaaaatgattcacaactggctactacgctagaTGAACTTGGTTTCTGCAATAAtgcactaaaagaatacgacaaggccaaagtatactatgagagagcactgttcattcgcgagaaaggagacaatgaaaatgattcacaactgtctactacgctagataaccttggtttctgccatactGCACTAAACGAATACGAAAAGGCCAAATtatactatgagagagcactgtccattcgcgagaaaggagacaatgaaaatgatctacTACTGTCTACTACGCTAGATAACCTTGGTCTCTGCCATCGAAAACTAGAACATTACGACAATGCTAAAGCgtactatgagagagcactgtccattcaagagagaggaaacaatgaaaatgattcacaactggctactacgctagaTAAACTTGGTCTCTGTCATCtgaaactagaacaatacgacaaTGCTAAAGCATACcttgagagagcactgtccattcgcgagagaggagacaatgaaagtgattcacaactggctactacgctagaTAACCTTGGTCTCTGTCATCTagaactagaacaatacgagaATGCTAAAGCGTACTATGAGAGAGTACTGTCTATTCAAGAAAAAGAGGacgatgaaaatgattcacaactggctactacgctaaataaccttggtctcTGCCATCGAAAACTAAAACAATACGGTAAGGCTAAAGCGTACTTTGAGAGAGTACTGTCCATTCGAGAAAAAGAAGacgatgaaaatgattcacaactggctactacgttaaataaccttggtcttTGTCATCTagaactagaacaatacgacatTGCTAAAGCATACcttgagagagcactgtcttttcgcgagaaaggagacaatggaaatgattcactactggctactacgctaaataaccttggtctcTGTCATCTAGAACTAAAACAATACGGCAATGCTAAAGCATACcttgagagagcactgtccattcgagagaatggagacaatgaaaatgattcacaactggctactacgctaaataaccttggtctctgccataatgaactaaaacaaTACGACAGTTCTATAGGAAAATTCATTGGCTGA

Transcript

ENSQPTT00000071644

TTTCTGCAATAATGCACTAAAAGAATAcaacaaggccaaagtatactatgagagagcactgtccattcgcgagaaaggagacaatgaaaatgattcacaactggctactacgctagataaccttggtttctgccatactGCACTAAACGAATACGAAAAGGCCAAATTATACTAtaagagagcactgtccattcgcgagagaggagacaatgaaagtgattcacaactggctactacgctaaataaccttggtctcTGCCATAgaaaactagaacaatacgataaGGCAAAAGCGTACTATGAGAGagtactgtccattcaagaaaaagtagaagaagaaaatgattcacaactggctactacgctaaataaccttggtctcTGCCAGagtaaactaaaagaatacgacaaggctaaagcgtactatgagagagcactgtccatttacgagaaaggagacgatgaaaatgattcacaactggctactacgctagaTAACCTTGGTCTCTGTCATCTagaactagaacaatacgataaAGCTAAAGCGTACTTTGAGAGAGTACTGTCgattcaagaaaaagaagacgatggaaatgattcacaactggctacaacgctaaataaccttggtctcTGCCATCgaaaactagaacaatacgataaGGCTAAAGCGTACTTTGAGAGagtactgtccattcaagaaaaagaagacgatggaaatgattcacaactggctactacgctagaTAACCTTGGTCTCTGCAATCgaaaactagaacaatacgacaagGCTAAAGCATACcttgagagagcactgtcatTTCGCGAGCTCGAGAGaggagacaatggaaatgattcacaactggctactacgctagaTAACCTTGGTCTCTGTCATCTAGAATTAGAACAATACGATAAGGCTAAAGCGTACTTTGAGAGGTCACTGTCTATTCAAGAGAaaagagacaatgaaaatgattcacaactggctactacgctaaataaccttggtctcTTCCATAgaaaactagaacaatacgataaGgctaaagcgtactatgagagagcactgtccatttacgagaaaggaatcaatgaaaatgatccacaacTGTCTAATACACTAAacaaccttggtttctgctatattaaactaaaagaatacgacaatgCGAAAGTATACTTGAAGaaagcactgtccattcgcgagagaGGAAGCGATGAAAATGGTTCACAACTGGCTAATACGCtagataaccttggtttctgccatagtGAACTAAAGAAATACGACAAGGCTAAAGAGTGCtgtgagagagcactgtctatgcaagagaaagaagagaaaggaggcaatgaaaatgattcacaactggctactacgctagaTGAACTTGGTTTCTGCAATAAtgcactaaaagaatacgacaaggccaaagtatactatgagagagcactgttcattcgcgagaaaggagacaatgaaaatgattcacaactgtctactacgctagataaccttggtttctgccatactGCACTAAACGAATACGAAAAGGCCAAATtatactatgagagagcactgtccattcgcgagaaaggagacaatgaaaatgatctacTACTGTCTACTACGCTAGATAACCTTGGTCTCTGCCATCGAAAACTAGAACATTACGACAATGCTAAAGCgtactatgagagagcactgtccattcaagagagaggaaacaatgaaaatgattcacaactggctactacgctagaTAAACTTGGTCTCTGTCATCtgaaactagaacaatacgacaaTGCTAAAGCATACcttgagagagcactgtccattcgcgagagaggagacaatgaaagtgattcacaactggctactacgctagaTAACCTTGGTCTCTGTCATCTagaactagaacaatacgagaATGCTAAAGCGTACTATGAGAGAGTACTGTCTATTCAAGAAAAAGAGGacgatgaaaatgattcacaactggctactacgctaaataaccttggtctcTGCCATCGAAAACTAAAACAATACGGTAAGGCTAAAGCGTACTTTGAGAGAGTACTGTCCATTCGAGAAAAAGAAGacgatgaaaatgattcacaactggctactacgttaaataaccttggtcttTGTCATCTagaactagaacaatacgacatTGCTAAAGCATACcttgagagagcactgtcttttcgcgagaaaggagacaatggaaatgattcactactggctactacgctaaataaccttggtctcTGTCATCTAGAACTAAAACAATACGGCAATGCTAAAGCATACcttgagagagcactgtccattcgagagaatggagacaatgaaaatgattcacaactggctactacgctaaataaccttggtctctgccataatgaactaaaacaaTACGACAGTTCTATAGGAAAATTCATTGGCTGACGAGGGAATTCCAAGTTGAATTCACGAGAAAAGGCGATATCGCCTTTTCTCGTGAATTCAACTTGGATTTCCCGAGTCAAGCCAATGAATTTTCCTTGAGTCCAATGACACTATTCAATCTGAGCGAatgtaaagaagaaaaaagaaaaaaatcgtgcGAGTTTAAGAAAACCTTGGCTCACGAAGGAAACCATTCTGATGTCATCCTCCCAACCAATAGGAATTCCGCTCAAAGGTGAGCGTTTGATCTTTTGGTTTGAATGACCTCGTGGCGAGCTGAATAATATTTGCTACTGTGGAAAAAGTAACTTTATTCTCGAAAATCGCCTTCGCTGAAATACTTCGTTTAATCTGTTACAACAATAATGACTTTTTCTCGTCTTGATCGAAATCTAAGGCAGTTCAGCAGTCTAAATGTGCGAAAATGTCATACAAAACAAAGAAGCTAACTGGTGAGTACACAAAACGTTTAAGACTTTTCTCTGAATTACACATTCAATTACTAAATAGActaaatgaaatcaaaataagtaaattcatttttcttcttcttcttctcagtTTTACTGTTGTGTAGCTCAGTTAGTGTTGGATGAAGAAAGAGCTAGCGATGGACACCATCCTGTAGATTGATGGAAATATTCACCGGTGAGTTGAATGTAACTCCGGTAAACAGTCCACTTACGGCTCCACTCAACCCAAGTCCATTATAATGGGCTTCGgcagctttacttgtttggtTCGCCTCATGACCTTCTTCATTGGCAGATATCTCATTCAAAGTGTTTCTTGCTGGTGATCTTGAACTTTCAACTACTGACGTACAGTTATACTACTTTGACTGCAAGAAGAAAATCCAACCAGCTTGTGGGACTTTTTTCGTTGTTTTTCTAATGGGTTATGGCTGTAAGTCGATATCGTTCAATGAATTAGCATGGCCAGTCAGTTCAGAAATTTCAAGCGGGTTGTAACCTTCTCGCAAGGCTTGGACTGCTGTTT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF07719 all species →	TPR_2	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR013105 all species →	Repeat	Tetratricopeptide repeat 2	Interproscan
IPR051787 all species →	Family	Effector and Ciliary Development-Associated Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000060761.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.