Gene detail

Detailed information of ENSQPTP00000061351.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031568342.1, uncharacterized protein LOC116303040 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000072268

ATGCCTCTACTTTCTCCCGAACAAAGAGTGGCAATAGCAATAGGAGTCCCTGCAGTAGCTCTCCTGTTGCTTTTATGGTACAGAAGACGACAGAGGGCAGAAATATCGGACGATGAAGACGACGAAGATGAACAAGAAACGTCGAAGGTTTCAACTATTTTTGAAACTAAGATTGAAGTAAAAGTCCCTCAAAATGTCGTTGGTTCTGTTATCGGCCGAGGAGGAGAAAATATCAAACAGATACAAAAGGAAAGCGGTGCTTATGTGAGATTTAAAGACGACGAGAAGGAGAAAGTTGAAGTTAGAGATGATTTTGATGCAACTCCACGAACACAAGACGACAAAATGAGAACAGTAGTGATAAAAGGCGAGAGAGAAAAGGCGAAAAAAGCTGAAATTATGATCAAAAAGGTTGTTTCTGACCAGCCTAAAACATTTACAATAGATTATTATATTCCTCAAAAGTCTTGTGGAAGGGTTATTGGCCGCGGAGGCTCAACTATCCGCCATCTTAGTAGAGTATCTGGTGCAAAGATAACAATTGACAGGAGTGAAATAAGAAGTGATGAACGTAGAAAATGTACGATAAAAGGTACTACTGACCAGATAGCTAACGCCAAGGGACTCATTGATGAACAGATTGCCGAACATGAGCTCGCAATGGCTAGGAAACCATTAAAACAAAGCAAGACATTAGTACAACCAATACAGGAACAGCAAGCACCAATAACCTCAGAAGAAGCACAGTCCTCGGCCAAGTACCCCAACACTTCTGACTACGAAGAGGTGTTCATTTCTGCTGTGGATAACCCAGGTCACTTCTGGATACAACTGGTCCGCACTGGGGATGCCCAGAAACTTGATTTGCTTATTGATACTCTGACGAATGACGCTGCAGCCAGCAGTGAAAATGACGTTGTAGATTCTGTTGAGGTTGGAATGGTTTGTTCTGCGCCTTTCTCCCATGATGATTCCAGATACCGTGCAAAAGTCACTCAAATCAACGATGATGGAACAGTGGCCTTATATTATGTGGATTATGGGGACTCAGATGCCGCAGTGCCCAAATACAGGCTGAGAAAACTCAAgGAAGAACACTTGCAGCTACCCTTCCAAGCAATCGAGTGCTACCTAGCAAACACTAAACCTAAAGATGGTACCTGGGAAGAAAGTGCTACTGAAGTATTCAAGAACCTAACACACTATCCTGACTGGAAGGTCATTGTGGTCAAAGCAATCAAATACTGTGGGGATATACCTTGTCTTGATGTTTATGACACGGTGACGGCACAGGATATTTGGGTCAATGATGAAATGATTAAGAGAGGATTTGCTGTTGAGGACACAGGATACCCACCACAACAACTTTCAACACCAGCAGAGAGCAAATCAGAAGGTAAAGATGTGACTAAGATAAAGAAAGATGAAAACTTGTCCCACGAGATGCCATCGGTAACAAACGTCACCTCACCTCAGGAACAGTCCCCCCACGATGAAAAAGATGCAGGTGAGAGCCTGGATCTACATGTCAGCGGCCCAGTCTCCCCCGAGAATTTCTCGCCAATTAAGAACGCGTTAGTGAAAAGAGTTTCCAAGGACTATATCGAAACTGCTCCTAAAGGAGGAGCTGAGGCATCAATAGGTGTTATTTCTGAAGAAGGAGCGCAGGAGGGACGTTCTGCAGTCATCGAGGAGCCGCTATTTCAAATGGGAGCACAACCTCAAGTTGAATCTGCACCGGAAGTAGCGCCTATACCGGAAGTTGGATCTTTAACAGAAGTAGAATCCGCGCCGGAAGTTAAATCTGTACCGGAATTAGAGTCGTCCCCCGGAACAACTGGTATGTACGAGTCAGAAAGTATTTATTTTCCTTCCTCGGGAATGAATCAAATGTCAGGCGTTGATTCAAATACGTTAGAACCTAAACcggaaaaaaaatatatgggCCAACCGGAAGAAAAAGATATGGGCCAACCGGAAGCAAGCGCTTCTAGTTTTTATTCTCCCAAGAAAAATACGTCACAGATTCTCAAACCGGAAGTACAGGAAATGATCCAAATTGAAGTGAGCAAGGCATTTGAAACAGAGCTCACGCCATCTCGCAACATTGTCACGCAATCTGCCGTCAGAGGTGGTAGTGAAAATGATGATTCTGAGAGAGAGAAGCTTGATGTTGCTGATTCTGGGATAGGCttgaatgataaaaatgaCAATGAACCCAAACATGTGGAAACTACTTTAAACGTCAGTGTGAACTCTCAGCCGTCAGTCCTTGTGATTGACACCAAGGGTAAAGATGATaccaatgatgatgatgatgatgatgatgatgatgatgacttagAAACCTTTACTTCGACTTTCCAAAAACAAGTCCAGGCCAAAAAGACGTTCGTGTCATCCGTGACTGTCACGTCAAACAAGCAAGCAGCTGTCACGCTAGTGCCCAGctatgaaaagaaagaatacgTGACAGAAGTGTCGGGTGAATCATCCAAGAAGTCTTACGCTCAAGCAGTTAGGTCTTCAAAGGAATTGAACCAAGAAGAAATTGACTCTTTGCATAAGTCTATCGCTGGGAATCAAGTGAAAGAGGGGGGACTGGGAACGATTTCTGGTAACCATGGCAACGTGTTTACCGTGCAACAAATTGAAATCCAAGCAAAACCCGACGGTGCAGTTGTCGTTGGTCCAGACGTCAATCACGTGACAAATAGACCCAATGAAGATGGAGCTTCTAACTCAACCAGTCAGACCGAACAAACCAGTTTGCCTACCATGGAGGGAGTAACAAACGGAAGAAAAGCTGATAGACGTAGTCCAGATACTGTTGACAGCGATTCTGAGTCCTACGTCAGTGCTCTAGATGAACCAGCCTCTGACACTGATACTACCAGTAACTACGAGACAGCCGCTGGCCCAACAAGTAGCAGCACCACGTCACTCGATTATAAAACAGCAGATAATGATACTGATACAGATACGTTAAGATCACCTGGAGAAGAGGGAGGAACCCCAGTCAACTCAGacagcgatgatgatgatgatgatgatgagtacTATGATAccgatgatgaagatgacagCGACGCTGGTGATAAGACACCTAAGAGGAAAGCATCTGAAGggaatgatgatgaagttACACCTACCCAGTCAGTGAAGACGGCTGCGAAGTATTTGTCGGATTTGGATCTCGGGTACCGAGGTGATGCCGAAGATACGACGGAATCACGCGAAGATCTACGATAA

Transcript

ENSQPTT00000072268

AGCAAATCCAGCGTGTTCACAAAAATTCAccaaaaaacaccaaaaattctccttattttctttcttttttctccaaaATGCCTCTACTTTCTCCCGAACAAAGAGTGGCAATAGCAATAGGAGTCCCTGCAGTAGCTCTCCTGTTGCTTTTATGGTACAGAAGACGACAGAGGGCAGAAATATCGGACGATGAAGACGACGAAGATGAACAAGAAACGTCGAAGGTTTCAACTATTTTTGAAACTAAGATTGAAGTAAAAGTCCCTCAAAATGTCGTTGGTTCTGTTATCGGCCGAGGAGGAGAAAATATCAAACAGATACAAAAGGAAAGCGGTGCTTATGTGAGATTTAAAGACGACGAGAAGGAGAAAGTTGAAGTTAGAGATGATTTTGATGCAACTCCACGAACACAAGACGACAAAATGAGAACAGTAGTGATAAAAGGCGAGAGAGAAAAGGCGAAAAAAGCTGAAATTATGATCAAAAAGGTTGTTTCTGACCAGCCTAAAACATTTACAATAGATTATTATATTCCTCAAAAGTCTTGTGGAAGGGTTATTGGCCGCGGAGGCTCAACTATCCGCCATCTTAGTAGAGTATCTGGTGCAAAGATAACAATTGACAGGAGTGAAATAAGAAGTGATGAACGTAGAAAATGTACGATAAAAGGTACTACTGACCAGATAGCTAACGCCAAGGGACTCATTGATGAACAGATTGCCGAACATGAGCTCGCAATGGCTAGGAAACCATTAAAACAAAGCAAGACATTAGTACAACCAATACAGGAACAGCAAGCACCAATAACCTCAGAAGAAGCACAGTCCTCGGCCAAGTACCCCAACACTTCTGACTACGAAGAGGTGTTCATTTCTGCTGTGGATAACCCAGGTCACTTCTGGATACAACTGGTCCGCACTGGGGATGCCCAGAAACTTGATTTGCTTATTGATACTCTGACGAATGACGCTGCAGCCAGCAGTGAAAATGACGTTGTAGATTCTGTTGAGGTTGGAATGGTTTGTTCTGCGCCTTTCTCCCATGATGATTCCAGATACCGTGCAAAAGTCACTCAAATCAACGATGATGGAACAGTGGCCTTATATTATGTGGATTATGGGGACTCAGATGCCGCAGTGCCCAAATACAGGCTGAGAAAACTCAAgGAAGAACACTTGCAGCTACCCTTCCAAGCAATCGAGTGCTACCTAGCAAACACTAAACCTAAAGATGGTACCTGGGAAGAAAGTGCTACTGAAGTATTCAAGAACCTAACACACTATCCTGACTGGAAGGTCATTGTGGTCAAAGCAATCAAATACTGTGGGGATATACCTTGTCTTGATGTTTATGACACGGTGACGGCACAGGATATTTGGGTCAATGATGAAATGATTAAGAGAGGATTTGCTGTTGAGGACACAGGATACCCACCACAACAACTTTCAACACCAGCAGAGAGCAAATCAGAAGGTAAAGATGTGACTAAGATAAAGAAAGATGAAAACTTGTCCCACGAGATGCCATCGGTAACAAACGTCACCTCACCTCAGGAACAGTCCCCCCACGATGAAAAAGATGCAGGTGAGAGCCTGGATCTACATGTCAGCGGCCCAGTCTCCCCCGAGAATTTCTCGCCAATTAAGAACGCGTTAGTGAAAAGAGTTTCCAAGGACTATATCGAAACTGCTCCTAAAGGAGGAGCTGAGGCATCAATAGGTGTTATTTCTGAAGAAGGAGCGCAGGAGGGACGTTCTGCAGTCATCGAGGAGCCGCTATTTCAAATGGGAGCACAACCTCAAGTTGAATCTGCACCGGAAGTAGCGCCTATACCGGAAGTTGGATCTTTAACAGAAGTAGAATCCGCGCCGGAAGTTAAATCTGTACCGGAATTAGAGTCGTCCCCCGGAACAACTGGTATGTACGAGTCAGAAAGTATTTATTTTCCTTCCTCGGGAATGAATCAAATGTCAGGCGTTGATTCAAATACGTTAGAACCTAAACcggaaaaaaaatatatgggCCAACCGGAAGAAAAAGATATGGGCCAACCGGAAGCAAGCGCTTCTAGTTTTTATTCTCCCAAGAAAAATACGTCACAGATTCTCAAACCGGAAGTACAGGAAATGATCCAAATTGAAGTGAGCAAGGCATTTGAAACAGAGCTCACGCCATCTCGCAACATTGTCACGCAATCTGCCGTCAGAGGTGGTAGTGAAAATGATGATTCTGAGAGAGAGAAGCTTGATGTTGCTGATTCTGGGATAGGCttgaatgataaaaatgaCAATGAACCCAAACATGTGGAAACTACTTTAAACGTCAGTGTGAACTCTCAGCCGTCAGTCCTTGTGATTGACACCAAGGGTAAAGATGATaccaatgatgatgatgatgatgatgatgatgatgatgacttagAAACCTTTACTTCGACTTTCCAAAAACAAGTCCAGGCCAAAAAGACGTTCGTGTCATCCGTGACTGTCACGTCAAACAAGCAAGCAGCTGTCACGCTAGTGCCCAGctatgaaaagaaagaatacgTGACAGAAGTGTCGGGTGAATCATCCAAGAAGTCTTACGCTCAAGCAGTTAGGTCTTCAAAGGAATTGAACCAAGAAGAAATTGACTCTTTGCATAAGTCTATCGCTGGGAATCAAGTGAAAGAGGGGGGACTGGGAACGATTTCTGGTAACCATGGCAACGTGTTTACCGTGCAACAAATTGAAATCCAAGCAAAACCCGACGGTGCAGTTGTCGTTGGTCCAGACGTCAATCACGTGACAAATAGACCCAATGAAGATGGAGCTTCTAACTCAACCAGTCAGACCGAACAAACCAGTTTGCCTACCATGGAGGGAGTAACAAACGGAAGAAAAGCTGATAGACGTAGTCCAGATACTGTTGACAGCGATTCTGAGTCCTACGTCAGTGCTCTAGATGAACCAGCCTCTGACACTGATACTACCAGTAACTACGAGACAGCCGCTGGCCCAACAAGTAGCAGCACCACGTCACTCGATTATAAAACAGCAGATAATGATACTGATACAGATACGTTAAGATCACCTGGAGAAGAGGGAGGAACCCCAGTCAACTCAGacagcgatgatgatgatgatgatgatgagtacTATGATAccgatgatgaagatgacagCGACGCTGGTGATAAGACACCTAAGAGGAAAGCATCTGAAGggaatgatgatgaagttACACCTACCCAGTCAGTGAAGACGGCTGCGAAGTATTTGTCGGATTTGGATCTCGGGTACCGAGGTGATGCCGAAGATACGACGGAATCACGCGAAGATCTACGATAATCAAACATTTGGATTTTGGGTACCGAGACAATGCCGAAGATTAGACGGAATCTCTCGAAGATCTACGATAGTCAAATATTTGGATCTCGGGTACCGAGGCGATACCGAAAATACGACGGAATCATGCGAAGATCTGCCACAATCAAACTTTTTTTGTCCTTTGACTTTAGTACTATTGCCAGTTTAACTTTTCATTTCGTAAGTAAAACCCAAGTTTTTTGTACTTGGAAGTCTACCTGCCTCAAccctcacccctccccctcctcaaaaaaggaaagaaaataataagctTAAATAAAAAGTCGAGCTAATAATGTTAAAAACTAATCATAATGGCTCTTGACCTCAACATGAAAATGACGCTTTATTCGTTATCATGTTTTCCCCTAAATAGTCTTTTCCAGTATTCGCTTGAGTGACCACTAAACAattgtttcaagtcgaggttggtcttgataaaatacagtaaatgtataaaCACACCAAGTCCAACCTCGAGTTGGTTACCTGAAAAAAATTCTCAAGGTAACGgaatttttataaatattttttgctaaAGCGTCCTTGAGAGATCAATAGTTATGGCTTACATTTGAAATTTAGCCCATTTCGGGTTTGGAAAAGAAACTAATGGTGCGGACTGATACACGATTCGATGTTCAATGCGTTCCTTCTGCGAAAGGTAAAAGAGCAGATATCAGACTATTGCCTTCAAACAATTTTCAGGTTATATATCCATCGTATTGATGCAAAGACCTTGACTTGAAAAATTGTTTAAAGGTGTAGTGCGTACCAAATATCCGTGAAATACTTCGTAAGAAAtccacaaattagtaagttcagtagacttcagaagaccgtagacctacaaaacctttcactaatttgtacttttttaaaaactttttcacggatatagaggatattacatgggcccgcggagatacgaattttatcttcgagtgttcaattgattcaattcgctgcgctcactcgtga

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9Y2W6	Tudor and KH domain-containing protein OS=Homo sapiens OX=9606 GN=TDRKH PE=1 SV=2
Q80VL1	Tudor and KH domain-containing protein OS=Mus musculus OX=10090 GN=Tdrkh PE=1 SV=1
O88477	Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus OX=10090 GN=Igf2bp1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005972 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00567 all species →	TUDOR	Tudor domain	Domain	Interproscan
PF00013 all species →	KH_1	KH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002999 all species →	Domain	Tudor domain	Interproscan
IPR035437 all species →	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR036612 all species →	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR050621 all species →	Family	Tudor domain-containing	Interproscan
IPR004088 all species →	Domain	K Homology domain, type 1	Interproscan
IPR004087 all species →	Domain	K Homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22948 all species →	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18406	TDRKH, TDRD2; tudor domain-containing protein 2	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.