Gene detail

Detailed information of ENSQPTP00000061541.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031567499.1, AP-4 complex subunit epsilon-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000072487

ATGGAGAGGTCAAGGGTTAGTCTACCGACGTTTATAACTGGATACCATGGATCTGGAATCAATTGCTCCAAAGGATTTCAAGCACTTGTTCGAGGGATTGGTGAAGCCAAGTCAAAAAATGAAGAAGACAGGATCATTAAAGCAGAATTCGCTGTTCTGAAGGAGAAACTTAGCCAACAATCCTCATCTAAACAGATGCGCGAGTACCTTATCCGTCTCATATACTGTGAGATGCTTGGAATAGATGCCTCAGATCTACACATCCATGCTATAAATTTTGCTCAACAAAGGAACTTACATGATAAAAGAATAGGATACCTTGCTTTGTCAATATTTTTACATGAAAATCACAGTCTTATACTACTATTGATCAACACTCTACAAAGGGATCTAACAAGTACTAATGTCCTTGAAGTGTGTTATGCCTTAACTGCCATCAACAAGCTGATCAATGCAGAAATGATTCCTGCCATTTTAAAATATGTGCTTGACCTTACAAACAACAAACGggACATCATTCGTAAGAAGGCTATCATGGCCCTACACACACTGTACCAAAAGAGTCCCTCGATGATCCCTGATGTCCTAGATATTGCCACAAATGGCCTGAAGGATAAGGACCTCAGTGTATCATCAGCATCTTTGATCCTACTCTATGATCTTGTTGTGGCTGATCCAGCATCCCACAAGCATCTCATCCCAGTGTTAGTATCTCTACAACAGAAAATAATCAGTGGCAAATTGCAGCAGGACTTTGACTATCATCGAGTACCAGCACCTTGGATACAGATCAAATTACTTCGGATTCTATCACTGCTAGGGTCAAATTCATATGCTGTGGCGTATGAGTGTACTCGTACTATTGCTACAATCTACCCAGATGAGAGGCTGGTCAAACAAGCTGCCAAGGTCGTTGGGCTTTTCTTGGTTGCCAAGAGCAACAATATTAAATATCTAGGTATAAATGCTTTAGCTGCATTGGTGGAAGTCAAAGCCAGCTTCGCAACAGAGCCGGCGTATCAACGAATAATTATCGATTGCCTCGACGATCCCGATGAGACTCTTAAACGGAAGACTTTAGACCTTCTTTGTCGCATTACTAATGCTGATAACGTGGAGTCAATCTGTGATAGGCTGATCAAGTACCTTAGAAACACTGTGGATGTCTACTTTAAAACAGATCTGGTTGCTAGGGTAACGGAGCTGGCAGAGAGATATCCTTTCATTGTGAAACCTTTATCGAACCTACTGGAGCTAGGAGGAGAACTGGTCCGAGAAGAGGTGGCGCATAACCTCATGAGGCTCATCGCTGAAGGgaatgaagatgaagatgcgGAGGAAGAATTGAGAAGATTTTCAGTGCTGTCTTACATAGACCTGATCGAAAAACCTGTTTTACCGGAAATTCTTGTTCAAGTAATAAGCTGGGTATTGGGCGAATACTCCTATACAGTACCAGAGTTGGAACCAGAATCTGTGATCGACAAACTGTGTTGTTTACTGGACAGGAATTACACAGATCCCAGTACCAAGCGATGGATAGTAACATCCATAGGCAAGATCCTGTCTCAGACAAGCAGTAGTCAAATGCCAAACAAAATACAACAGATTTTAACATCAGCCACTTCAGATATCGACATATTACAGCGATGCCATGAAATCGAAATGTTGTCCAAAAATTCGAGCCTCATGCGGAAAGTGTTACCAGAAGATGCGAGCTGTGAAGACATAGAGGTTGACTCATCACTGTCGTTCCTGGATGATTACGTTACCAAGGCGTTACAACAGGGAGCCTCTCCTTACTTACCCGAGGATCAACGAGGAAACGATGAGAcgacaataaaaatgaaagAAATCAAAGCTGAAGATCCAAAGCTCAAGCTCACCCCTTACAATTTCCCCAAACCCCCTATCAAAGAACCACGCCCAAGACCTGTCACCATCGAAATAGACGAACCAAAACCCAAACCAAATACTGCAACTTACACTAAGAGAAGAGTCCTGGAAGAACCAACTACTTTGAAGGCCATATCTGGTGTACAGGGACCTTGGGGGCCTAAAGGGTACTCTAAGGGACTAGGGTCAGGGTCAGGGGAATCAGAGAGCATTTCGGGATCATCGTCCAGGAGCTCTGGGTCCGAGCGGTTGCCAGTACTAACGAGTAAATCCGAGATTTCTCCAAGCCCGCTTGTCTTTACACATGAAGACAAAAGCAAGCAACGCCTGGTTAATGATCTTTTCAAAGGAGTTGGAGACAAGGCTCAAATCTCCGGTAGAAAAGGTACTGCCGCCCGCGGGACTGGTCGGGCAACTCGCTCGACCCCCCGCAAAAAAATCCCCGATATATCCGATCCTGGCCAACCCCCTGTACCTCCACCACgaaaatatttagaaaaaaacaccatGGCAACAAATGAAGTCGATCTGCTGTTAAGCCTGGACAATGATTCCCAGTCTCCTCGGACAGACACGAACGAGTCTGTTTCAGAGGGACTGGTTACCACTGGAGATAATTTCAATGAACTTTTATACGATTCAGAAAACACGGCAACTGTGGTTCCTCTAATGACTGAACGAACTGATAAAGACATTTGTAAGGAGAGCAGTAGTGATGTTTTACCGCCGGGTAATGATATTTTGAAAGTAGAGTTGGTTACTGATGATGGTAACCCGGAAAAGGGTAAAATCCATGAAGACTTGACGGATATGAAGGAACAAGAGGATTCAAGAGAGCTATTAATAGAGCATCAAAGTGCTTTAGACCTAGGACCAAAATCGTCCGACATGAATAACCCGATAGAATCTTTAATTGATTCTGATATATCTGAGGACGTTAATCGACTTGCATTGAACGAAGAACGTGTATCTGACCTCACGGTGCCCGACGAACTGAAAGACTATCCCACATCACGTGACAAGATAGATCTCTCTTCGGATGCCAACATAAGGGTAACACTACAAAAAGTTTACAAACCGGATGAACttgttttggttgtttttctgaccaatcagagtaaAGGAAACCTTCCTGTGACAAACGTCGTGACGTCGCTAAACCCGCCGTCAAATCTACGAGCATCATTCGATTCGTCGAGTGATAATCGATTCGTCGACGAAGAAATTAAGCCGTTGTCGTCGGTTACCCACGTGTTGGCCTTACAGTACAAATCACCAGCCCTACACATGACACTAGGCGGCAAAGTAACGTACAAAGATTCCACCAACACACTCAAGACCATGTTCATCAGCCATGTTCTACCCATCCGGGACCTTCTGCGTCCGCTGACCATCGATACTGACGGCTTTGGCGATAAATGGAGTGAGACACCGTTtgagaaaagacaaaaagttGATTCTATGGTCAAGAGTTGTGAGGAGTTTCTAGGCCGAGTTGAGGAAGGCCTGGGTTTGAATGCAATTGATACCATTGGCTCAAAAGCCATAGCCGCTGGCACCGTTCTCCAAGGCCCTGTCTGTCTACTACATGGAATGGTTAACAGCAATGGGGCTCTGGATCTTCGGATTAAAACTAATAGTCAACTTCTCAGTGAAGCTGTGATGCAGCAATGCCTCGCTATTTTGAAATAA

Transcript

ENSQPTT00000072487

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8L7A9	AP-4 complex subunit epsilon OS=Arabidopsis thaliana OX=3702 GN=At1g31730 PE=1 SV=1
Q9UPM8	AP-4 complex subunit epsilon-1 OS=Homo sapiens OX=9606 GN=AP4E1 PE=1 SV=2
Q80V94	AP-4 complex subunit epsilon-1 OS=Mus musculus OX=10090 GN=Ap4e1 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002707 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14807 all species →	AP4E_app_platf	Adaptin AP4 complex epsilon appendage platform	Domain	Interproscan
PF01602 all species →	Adaptin_N	Adaptin N terminal region	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028269 all species →	Domain	AP-4 complex subunit epsilon-1, C-terminal	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR050840 all species →	Family	Adaptor Complexes Large Subunit	Interproscan
IPR002553 all species →	Domain	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22780 all species →	ADAPTIN, ALPHA/GAMMA/EPSILON	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0030124 all species →	Cellular Component	AP-4 adaptor complex	Interproscan
GO:0140312 all species →	Molecular Function	cargo adaptor activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030117 all species →	Cellular Component	membrane coat	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12400	AP4E1; AP-4 complex subunit epsilon-1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.