Genomic Location: not available for this species
NR annotation: XP_031558066.1, CCR4-NOT transcription complex subunit 1-like isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families
| CDS |
| ENSQPTT00000073075 |
| Transcript |
| ENSQPTT00000073075 |
| Protein |
| ENSQPTP00000062064.1 |
| UniProt accession | Description |
|---|---|
| A5YKK6 | CCR4-NOT transcription complex subunit 1 OS=Homo sapiens OX=9606 GN=CNOT1 PE=1 SV=2 |
| Q6ZQ08 | CCR4-NOT transcription complex subunit 1 OS=Mus musculus OX=10090 GN=Cnot1 PE=1 SV=2 |
| A1A5H6 | CCR4-NOT transcription complex subunit 1 OS=Danio rerio OX=7955 GN=cnot1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002577 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF16418 all species → | CNOT1_HEAT | CCR4-NOT transcription complex subunit 1 HEAT repeat | Domain | Interproscan |
| PF16415 all species → | CNOT1_CAF1_bind | CCR4-NOT transcription complex subunit 1 CAF1-binding domain | Repeat | Interproscan |
| PF12842 all species → | DUF3819 | CCR4-Not complex, Not1 subunit, domain of unknown function DUF3819 | Domain | Interproscan |
| PF04054 all species → | Not1 | CCR4-Not complex component, Not1 | Repeat | Interproscan |
| PF16417 all species → | CNOT1_TTP_bind | CCR4-NOT transcription complex subunit 1 TTP binding domain | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR040398 all species → | Family | CCR4-NOT transcription complex subunit 1 | Interproscan |
| IPR032194 all species → | Domain | CCR4-NOT transcription complex subunit 1, HEAT repeat | Interproscan |
| IPR032191 all species → | Domain | CCR4-NOT transcription complex subunit 1, CAF1-binding domain | Interproscan |
| IPR038535 all species → | Homologous_superfamily | CCR4-NOT subunit 1, TTP binding domain superfamily | Interproscan |
| IPR024557 all species → | Domain | CCR4-NOT transcription complex subunit 1, domain 4 | Interproscan |
| IPR007196 all species → | Domain | CCR4-Not complex component, Not1, C-terminal | Interproscan |
| IPR032193 all species → | Domain | CCR4-NOT transcription complex subunit 1, TTP binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13162 all species → | CCR4-NOT TRANSCRIPTION COMPLEX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000288 all species → | Biological Process | nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | Interproscan |
| GO:0000932 all species → | Cellular Component | P-body | Interproscan |
| GO:0017148 all species → | Biological Process | negative regulation of translation | Interproscan |
| GO:0030015 all species → | Cellular Component | CCR4-NOT core complex | Interproscan |
| GO:0060090 all species → | Molecular Function | molecular adaptor activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K12604 | CNOT1, NOT1; CCR4-NOT transcription complex subunit 1 | - | Messenger RNA biogenesis | ko03019 | deepkoala |
