Gene detail

Detailed information of ENSQPTP00000062859.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031561778.1, hemicentin-1-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000073969

ctttaaaTTTCTTTCGTTTCGTGATGCTCAAAATGTCAACTGACTGATGAAGCGTCCCTCAAACCAGCCCCATAATACAACGCATTTCAAGGAATCCAGGACTAAAACaaGGAATAACGATTGTCAAGAAGCCATATAGCCAATATGATGTCCAAGAGGGTAGCATTTTCCCTCTGCCATGCAAGGCCGATTCACCGGATGGGGACCCTATTTCATATAAATGGTTATTCAATGATGCACTCTTAACGTACGATAGTTACAGGGAATGGCAAGCATACGATCATGAGCTACAGCTTCGAAATCTAAAAACAATACACTCTGGTAATTATACATGTGTAGCGTACACCACTGGAGAAAGGATATCGGAAGCTTCAGTAAGCACAAACGTCAATATAAAGGaaaaactaAAGATTGTCAATAGGCCGGTAAATACAACTCTAAAGGTCGTCGAAGGTTCCTCCTTGAGTCTGCCATGCAAGGCCAATTATCCAGACGACGACGGCAAAGTTAAGTACAGTTGGTCCTTCAATTGGGAAGAAATAGATTATGACAATCACATTGAATGGCGGGCAAGCGATTATAAGCTATTGATTAAATCTGCACAAGTAAAAGATTCTGGTATCTATTCATGTTATGTCACAGCCTATAGCTTGGGTTTCGGCGCGGTTTATATTGACATTGACATCACGATATATGagGGAATAACGATTGTCAAGAAGCCATATAGCCAATATAATGTCCAAGAGGGTAGCATTTTCCCTCTGCCATGCAAAGCCGATTCACCGGATGGGGACCCTATTTCATATAAATGGTTATTCAATGATGCACTCTTAACGTACGATAGTTACAGGGAATGGCAAGCATACGATCATGAGCTACAGCTTCGAAATCTAAAAACGATACACTCTGGTAATTATACATGTTTGGCGTATACCACTGGAGAAAGGGTATCGGAAGATTCAGTAAGCACAAACGTCAATATAAAGGaaaaACTAAAGATTGTCAATAGGCCGGTAAATGCAACTCTAAAAGTCATCGAAGGTTCCTCCTTGAGTCTGCCATGCAAGGCCAATTATCCAGACGACGACGGCAAAGTTCAGTACAGTTGGTACTTGAATTGGGTAGACATAAATTATGACAATCACACTGAATGGCGGGCAAGCGATTATGAGCTATTAATTAAATCTGCACAAGTAAAAGATTCTGGCATCTATACTTGCAATGTCTCAGCTATAAGCTTGGGTTTGGGCACGGTTTCAATGGACATTGACATCACGATATATGAAAAACTAAAGTTTGTTAATTGGCCTGTGAAAAGCTCTGTAAGCGCCAAAGAAGGTGCCTCCTTGAGCCTGCCATGCGAGGCCAATTATCCAGACGATGAAAACAAAGCTCAGTACAGTTGGTCCTTGAATTGGTCACCCTTAAATTATGACAATAACATTGAATGGCGGGCAAGCGATTATGAGCTATTAATTAAATCTGCACAAGTAAAAGATTCTGGCATCTATACTTGCAATGTCTCAGCTATAAGCTTGGGATTGGGATGGGTTTCAATGGACATAAATATCACGATACATGCGGAAAGATTTTCCTTTACAGCATGGGGCGCATGGAGCGAATGTATATCCAATTCTGGCTCTAACATAGGCAACCGGACTCGTTTTCGCACCTGTGTTACGTCATCAGAAATAGAGGCACCCGGTAGATGCAGCGGCAATTCAAAACAGGTTGAGGACTGCGACATCGAATTTTCTACTCCTATAATTCCTTTAAGCGCACCCGCTAATAGGAGCAAAGAAGAAGCCATGGTTGGAGTGAGAGAAACAACAGTTTCAACACCTACGAAATCTAAATTTTTGAATACTTTCTATGGGAAACTGGCTTTAGGAAGTTCAGTGGTAATAGTGGTCGTGATATTAGGCTGTGCTGTCTTTGTTCTCATATGGCAACACCACCTAAACTCTACGAGCAACAAAGTTGTCCCTATTAAATATTTATCCATGTAACTCGCACAAATCTTAACCTGATATTTACATACCCCAATGTGTTTACTCAGAATCTCCTGGTCTCTCAGTAGAGAATGGGGACATATCTGTCATCGAGGAAGATGGACAAATCCCATAGTCCTAATTCCAGGCTCGATAACCAATTGACCTCGTTCATAgtctttatttcaaaatttggaGTTTTTGGCTGTGGCATTTGATAAGCCTTTCTGCAGGCATGCTTCGCGATGCTTCGCGTGGATGTTTGAGTGGACGCTTTAAGACATGGCGATTTGTGGCCGTCTGTTTATtgatgtatttatttattatgctTCCAACAAACTGTTGAAGAGAACTAGAGAGGTAATACCACCTATAGGATAGTCTCCCAATGaaattacaaaatatatagagtgcaagccatatatccgtgaaatagtactaactatttagtacaaaattgcaccaatgaaacaatagacccttttcgagttccaaattaccggtgtgtttcttgattacagactcatttgctcaggcttagcctcgaatgagtgtctaaatattcacaaataccgacggtaaagtaaagaatacacaacttcaacaatacgaacactttaGAACTTGACGGacccttgactggaacacgtgaatattcttcacaaaatcgaggctaggcctgagt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q12860	Contactin-1 OS=Homo sapiens OX=9606 GN=CNTN1 PE=1 SV=1
Q63198	Contactin-1 OS=Rattus norvegicus OX=10116 GN=Cntn1 PE=1 SV=2
Q28106	Contactin-1 OS=Bos taurus OX=9913 GN=CNTN1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0014037 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10075 all species →	BASIGIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007411 all species →	Biological Process	axon guidance	Interproscan
GO:0030424 all species →	Cellular Component	axon	Interproscan
GO:0070593 all species →	Biological Process	dendrite self-avoidance	Interproscan
GO:0098632 all species →	Molecular Function	cell-cell adhesion mediator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000062859.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.