Gene detail

Detailed information of ENSQPTP00000064711.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031562481.1, E3 ubiquitin-protein ligase TRIP12-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000075962

ATGGCCGAGAGCTCTGTGGAAGGGGAACAAGGGGGGACAGTTTTTCGTTCAAAAAGCAAACTTCCAGCAAAGAGAAAGTCACAGACTAATTTAAGTGGTGAATACAAAGTGGAGGAAAAGAAaTCCAAAAAATCCTCTCCCAGCACTGCTGGTTCACAAagcatcacatcatcatcttcgCACTACAATTTGAGGCCAAGAGTTTGTTTATCATCAAGCACTACTTCAGTTACAACCACCCAGAGTTCTTCTAGAATCCAAAGCACAAAGACATTAGCTGCAAAGAAATCATCTTCTAGCCCTTCACTAGGTGCAAGAGGAACAGAGAAAGGCACTGAAAAGTCAGCAAGACAGTTGAAAAAGACACAACGGGAAGCGCCAAAACTAACTGGTTATTCATCTTCACCAGTGGCAGCAGCATCCGCATTGCCATTTTATAACTTAACGTCAACATCATCAGATACAACAGTTACTTTCAAATCCAAAGTTCCCAAGACAGATTCCTCTCATAAGTCTGCATCTGATTCAAGACTTTCAAGCAAGCTTAATTTCCTGAGAGCTTCACTCACTTCAGGAGCTCACCGAGGCAAAGATCTGGGTAATCACTCTACTTCCGAGGGCTCTAGGGGCTCTCAATCATCTGCACAAAGTCATAGAGGTGACCCGCCTAAGCCAGAAGGCTCAAGGCGGTCACAAAGAACTACCGAAGCTACGGGTTCCTGTGCTAGCAACAGTCGGCGTGGCTCACAGACGAAGAAGAGGACCTGGACCCGCCGACAGCAGCCTAGCATGTCAACAGAAGAtggGTTGTCAGAACAAGGAGCATCAGCAGGTCAACCACGCCTTAATGAAGCAGGCCAGTCATCCAGTAGTGCAGCAGAAAGAAATGATGGAAGTGCCAATTCTCATTCAGATGATAATGAATTGAAAGATAGTGACATGTCCAGACTACAAAGTCTGTTAGAGGCACGTGGAGTACCACCACACCTGTTTGGTTCTCTTGGACCAAGGATGCATCAACTGCTACACAGAGCCAGCAGTAACAGTTCTAATAGTAAAGCACAGCAACTACTTCAAGGAATCCAATCATCAGATGAAGGACAGCAGTTGCAAGCAGTGATAGAGATGTGTCAGTTACTTGTGATGGGTAATGAGGAGAGTCTTGCTGGGTTTCCCGTCAAGCAAGCTGTGCCAGCACTGATAAATTTACTCAACAAGgaacaaaaatttgaattgGTAAATCATGCCTGTCGTGCACTGACTTATCTTATGGAGAGTCTACCAAGGTCTACAATGGTTGTTGTAGAAGCAATACCAGCTTTCTTGGAAAAGCTTCAATCAATAGAGTGTATGGATGTAGCAGAACAGTCTCTAACAGCACTGGATATGCTTTCTAAAAGACATGGAAAAGCTATTCTACAAGCTGGTGGTATGTCAACCTGTCTTCTTTTTCTGGACTTTTTCTCAATAAGTGCACAGAGGTCAGCTCTGGCGATTGCTTCCAACTGCTGTGCTAGTGTTGGTCCAGATGACTTTCATTATATTGCTAATGCTATTGAAATCCTAAGCACAAGACTACAGATACAGGATAAGAAGAGTGTAGAAAGTTGCTGTCTTGCATTCTCTAGACTAGTGGATAGCTTCCAGAATGATAAGAAACACTTAAAAGATCTTTCAGCTCATGGTTTACTGAACAACATACAACAGTTGTTGATAGTATTCCCACCCATTATAAGTACTGGTACGTTCGTAATGGTTTTAAGGATGCTATCATTACTCTGTTCCAACTGCCCAGACCTTGCGGTTGATCTTATTAAGAACAATATTGTGGAGACTTTACAGTTTCTGTTGTTTGGTAGTGTTGGCCAAGACATAGAGGATAATGTTGAACTCATCACTAGAAGTCCACAGGAATTCTTTGAATTAACCTGCTCCATAAGtgAGCTGTTTCCTAAACTTCCACAAACTGGTGTATTTTCTGTCGATGCCCTGCTCAACAAAAGTCAGCAGAGATCAGAGCATGGTTTATGGCAATGGCGTGATGACAGGGGGGTCTGGCACTCTTATTCCTGGATTGACAGTAAAATAATTGAAGCAGCTTACCATAGTGGTGAAGACGAGCTAAGCCTTGCTACCATGGGACGCACATATACTATTGACTTGAATGCCATGCAGCAGATCAATGAGGATACAGGGACAACTAGACCAGTTCAAAGGTGCAATGGATCAGGAGAATCCAGCTCAACTTTATCAAGCAAAGCAGAATCTGTCAAAGTAGACAGTAGAATAGCTATTCTACAAGAAGACAGCTTGCTGGAAGATTCCTACACATACaagcttttttcttgtctataTAGCATATTGAATTCTTCTGTCAGTATTGCTATTAGGAATAGATGTGTTAATGCCATTCTAAGGATGATATATTATGCACCGGCAGAACTACTGCAGGTTATTCTTAAAAGACATCCAATATCAAGTATTATTGGTGGAATGCTGCAGTCACATGACATTAGGACACTTGTTAATGCCCTGCAATTGGCTGAGATCTTGATGCAAAAGTTACCTGATGTATTCCATATCTCGTTCCGCCGAGAAGGTGTCATGCACAAGGCCAAGTCACTAGCAAGTGGTTCTGTCCTGGAAAACTCTTCATCACAGGGGAAAGAAGTGAAGAGGTGTTCTGCAGCAGCTCCTGTTGTGGCTGGTGAACCTTACTCAACTCATTGCACTCATCCTATACAAGTCTTTGAAAAACCACCATCCCCACCTTCAagGCTTGGTGAAGTGCTCAGAGGAAAACGGAGATCCAAAAGAAACCCAAGGAGCAAAGAGAAATGCCAGAGTGTAATGGAACCAGACCTTAAGAAACAGACTGAAGTAACACATCTGACCAAATCAGTGAATCTCCCTACTACCTCATCTCTATCACACCACAGCAAACCATCTTTCTTCTCATCACTGACATCAGCAAGATGGAATGCTAAggcatcaacatcatcattgttGTCGTCATCAGATGGATTACCTAGGGTTGATGTCAATAGTCTGAACACCACACTTCATGCTCTCAGTACATCACGTATGTCTGACAATAAAGAAAAGATACGAACGTGGATCAAGGAGCAAGCCATCAAGTTTTGTGCTACATATTTTGATGAGGAACAAGGAAAGTCCCACCCTGGTTTAGATGTGCTACAAAAACTCAGCAATGCTAAAGAAAACCTTGCTACAAATGTTAAAGACAATACAGAAGTCTTGAAGGTTATAAGATGTGTTTTATCTGACTCAGAAGAAGGAGCCAGTCCATTTGAGATTCTACACAGTGGTTTGGTACCACAGCTGTTAAGGAAAGTGGTGATGTCACAGCTGTTCCTCTGA

Transcript

ENSQPTT00000075962

ATTGGTTGTTGTTTCACAGGAAGCAGAGGCAGCAGTGGTCGTGTGTTGCCTTGTAAATAACCATTACTCTTATTCTCGTTTACACAAAAAACCTACATCACGACACAAAACGTCGTCCATTAAACACTACTTCCCTTCTTCCTTGGTAACTCTGTCCGTTCAAACAAATTGCGACCCCTTTTACGACAGGGTCGCGATGCTTTGATGGCCGAGAGCTCTGTGGAAGGGGAACAAGGGGGGACAGTTTTTCGTTCAAAAAGCAAACTTCCAGCAAAGAGAAAGTCACAGACTAATTTAAGTGGTGAATACAAAGTGGAGGAAAAGAAaTCCAAAAAATCCTCTCCCAGCACTGCTGGTTCACAAagcatcacatcatcatcttcgCACTACAATTTGAGGCCAAGAGTTTGTTTATCATCAAGCACTACTTCAGTTACAACCACCCAGAGTTCTTCTAGAATCCAAAGCACAAAGACATTAGCTGCAAAGAAATCATCTTCTAGCCCTTCACTAGGTGCAAGAGGAACAGAGAAAGGCACTGAAAAGTCAGCAAGACAGTTGAAAAAGACACAACGGGAAGCGCCAAAACTAACTGGTTATTCATCTTCACCAGTGGCAGCAGCATCCGCATTGCCATTTTATAACTTAACGTCAACATCATCAGATACAACAGTTACTTTCAAATCCAAAGTTCCCAAGACAGATTCCTCTCATAAGTCTGCATCTGATTCAAGACTTTCAAGCAAGCTTAATTTCCTGAGAGCTTCACTCACTTCAGGAGCTCACCGAGGCAAAGATCTGGGTAATCACTCTACTTCCGAGGGCTCTAGGGGCTCTCAATCATCTGCACAAAGTCATAGAGGTGACCCGCCTAAGCCAGAAGGCTCAAGGCGGTCACAAAGAACTACCGAAGCTACGGGTTCCTGTGCTAGCAACAGTCGGCGTGGCTCACAGACGAAGAAGAGGACCTGGACCCGCCGACAGCAGCCTAGCATGTCAACAGAAGAtggGTTGTCAGAACAAGGAGCATCAGCAGGTCAACCACGCCTTAATGAAGCAGGCCAGTCATCCAGTAGTGCAGCAGAAAGAAATGATGGAAGTGCCAATTCTCATTCAGATGATAATGAATTGAAAGATAGTGACATGTCCAGACTACAAAGTCTGTTAGAGGCACGTGGAGTACCACCACACCTGTTTGGTTCTCTTGGACCAAGGATGCATCAACTGCTACACAGAGCCAGCAGTAACAGTTCTAATAGTAAAGCACAGCAACTACTTCAAGGAATCCAATCATCAGATGAAGGACAGCAGTTGCAAGCAGTGATAGAGATGTGTCAGTTACTTGTGATGGGTAATGAGGAGAGTCTTGCTGGGTTTCCCGTCAAGCAAGCTGTGCCAGCACTGATAAATTTACTCAACAAGgaacaaaaatttgaattgGTAAATCATGCCTGTCGTGCACTGACTTATCTTATGGAGAGTCTACCAAGGTCTACAATGGTTGTTGTAGAAGCAATACCAGCTTTCTTGGAAAAGCTTCAATCAATAGAGTGTATGGATGTAGCAGAACAGTCTCTAACAGCACTGGATATGCTTTCTAAAAGACATGGAAAAGCTATTCTACAAGCTGGTGGTATGTCAACCTGTCTTCTTTTTCTGGACTTTTTCTCAATAAGTGCACAGAGGTCAGCTCTGGCGATTGCTTCCAACTGCTGTGCTAGTGTTGGTCCAGATGACTTTCATTATATTGCTAATGCTATTGAAATCCTAAGCACAAGACTACAGATACAGGATAAGAAGAGTGTAGAAAGTTGCTGTCTTGCATTCTCTAGACTAGTGGATAGCTTCCAGAATGATAAGAAACACTTAAAAGATCTTTCAGCTCATGGTTTACTGAACAACATACAACAGTTGTTGATAGTATTCCCACCCATTATAAGTACTGGTACGTTCGTAATGGTTTTAAGGATGCTATCATTACTCTGTTCCAACTGCCCAGACCTTGCGGTTGATCTTATTAAGAACAATATTGTGGAGACTTTACAGTTTCTGTTGTTTGGTAGTGTTGGCCAAGACATAGAGGATAATGTTGAACTCATCACTAGAAGTCCACAGGAATTCTTTGAATTAACCTGCTCCATAAGtgAGCTGTTTCCTAAACTTCCACAAACTGGTGTATTTTCTGTCGATGCCCTGCTCAACAAAAGTCAGCAGAGATCAGAGCATGGTTTATGGCAATGGCGTGATGACAGGGGGGTCTGGCACTCTTATTCCTGGATTGACAGTAAAATAATTGAAGCAGCTTACCATAGTGGTGAAGACGAGCTAAGCCTTGCTACCATGGGACGCACATATACTATTGACTTGAATGCCATGCAGCAGATCAATGAGGATACAGGGACAACTAGACCAGTTCAAAGGTGCAATGGATCAGGAGAATCCAGCTCAACTTTATCAAGCAAAGCAGAATCTGTCAAAGTAGACAGTAGAATAGCTATTCTACAAGAAGACAGCTTGCTGGAAGATTCCTACACATACaagcttttttcttgtctataTAGCATATTGAATTCTTCTGTCAGTATTGCTATTAGGAATAGATGTGTTAATGCCATTCTAAGGATGATATATTATGCACCGGCAGAACTACTGCAGGTTATTCTTAAAAGACATCCAATATCAAGTATTATTGGTGGAATGCTGCAGTCACATGACATTAGGACACTTGTTAATGCCCTGCAATTGGCTGAGATCTTGATGCAAAAGTTACCTGATGTATTCCATATCTCGTTCCGCCGAGAAGGTGTCATGCACAAGGCCAAGTCACTAGCAAGTGGTTCTGTCCTGGAAAACTCTTCATCACAGGGGAAAGAAGTGAAGAGGTGTTCTGCAGCAGCTCCTGTTGTGGCTGGTGAACCTTACTCAACTCATTGCACTCATCCTATACAAGTCTTTGAAAAACCACCATCCCCACCTTCAagGCTTGGTGAAGTGCTCAGAGGAAAACGGAGATCCAAAAGAAACCCAAGGAGCAAAGAGAAATGCCAGAGTGTAATGGAACCAGACCTTAAGAAACAGACTGAAGTAACACATCTGACCAAATCAGTGAATCTCCCTACTACCTCATCTCTATCACACCACAGCAAACCATCTTTCTTCTCATCACTGACATCAGCAAGATGGAATGCTAAggcatcaacatcatcattgttGTCGTCATCAGATGGATTACCTAGGGTTGATGTCAATAGTCTGAACACCACACTTCATGCTCTCAGTACATCACGTATGTCTGACAATAAAGAAAAGATACGAACGTGGATCAAGGAGCAAGCCATCAAGTTTTGTGCTACATATTTTGATGAGGAACAAGGAAAGTCCCACCCTGGTTTAGATGTGCTACAAAAACTCAGCAATGCTAAAGAAAACCTTGCTACAAATGTTAAAGACAATACAGAAGTCTTGAAGGTTATAAGATGTGTTTTATCTGACTCAGAAGAAGGAGCCAGTCCATTTGAGATTCTACACAGTGGTTTGGTACCACAGCTGTTAAGGAAAGTGGTGATGTCACAGCTGTTCCTCTGAATGATCAGAAGAAACCACCTTTAGCATCTCTTGTTGCTAAGTTACACTCTTGTGTCAACCAAGTAGAACAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B4F6W9	E3 ubiquitin-protein ligase TRIP12 OS=Xenopus tropicalis OX=8364 GN=trip12 PE=2 SV=1
G5E870	E3 ubiquitin-protein ligase TRIP12 OS=Mus musculus OX=10090 GN=Trip12 PE=1 SV=1
F1LP64	E3 ubiquitin-protein ligase TRIP12 OS=Rattus norvegicus OX=10116 GN=Trip12 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003745 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02825 all species →	WWE	WWE domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR018123 all species →	Domain	WWE domain, subgroup	Interproscan
IPR045322 all species →	Family	E3 ubiquitin-protein ligase HECTD1/TRIP12-like	Interproscan
IPR004170 all species →	Domain	WWE domain	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR037197 all species →	Homologous_superfamily	WWE domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45670 all species →	E3 UBIQUITIN-PROTEIN LIGASE TRIP12	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0016607 all species →	Cellular Component	nuclear speck	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000064711.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.