Detailed information of ENSQPTP00000066349.1 in Actinia mediterranea

Genomic Location: :...
NR annotation: XP_031559186.1, H/ACA ribonucleoprotein complex subunit CBF5-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O43100H/ACA ribonucleoprotein complex subunit CBF5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cbf5 PE=2 SV=1
O43102H/ACA ribonucleoprotein complex subunit cbf5 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=cbf5 PE=2 SV=1
Q9LD90H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan
PF01472PUAPUA domainFamilyInterproscan
PF08068DKCLDDKCLD (NUC011) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan
IPR012960DomainDyskerin-likeInterproscan
IPR002478DomainPUA domainInterproscan
IPR004521DomainUncharacterised domain CHP00451Interproscan
IPR004802FamilytRNA pseudouridine synthase B familyInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR036974Homologous_superfamilyPUA domain superfamilyInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23127CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006396Biological ProcessRNA processingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000495Biological Processbox H/ACA sno(s)RNA 3'-end processingInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0031118Biological ProcessrRNA pseudouridine synthesisInterproscan
GO:0031120Biological ProcesssnRNA pseudouridine synthesisInterproscan
GO:0031429Cellular Componentbox H/ACA snoRNP complexInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11131DKC1, NOLA4, CBF5; H/ACA ribonucleoprotein complex subunit 4EC:5.4.99.-
DNA replication proteinsko03032deepkoala

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