Gene detail

Detailed information of ENSQPTP00000066930.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031552536.1, hemicentin-1-like, partial [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000078519

GGACATTAGCACCAGAAATAACAAATCCGTACAAACAAGAATTAGCAGTTAAAGAAGGCAAGGACGTTAGTCTTGTTTGCAATGCCAGTGGATACCCAGTACCTAATATCACCTGGACGAAGCATGGCACTGTCATTGGTGTTGGAAGAATATTCAATATAACACGAGTAAAAAGGAACGATTCATCGTGCTACACGTGTACAGCAGATAATGGTATTGGACACGCCAAGAATGTCAACATATGTTTAGATGTGCAATATCCACCTTCCAACATTAATGTTCTATCATCGAGAAGGCAAATGATTCTAAAAGAGGGGACTAGTTTTTCCCTTTATTGCCAAAGTGACAGCAATCCACCACCGACTTACACATGGAAGCATAATGAGGTGACATCAGCTGATGGGCAAAATGGCATACTAGTATTCAACAGCATCAAGCGAAAACAAAACGGAACATACCAATGTGAAGCGAAAAATCCTCTTGGCTTGCTCCAATCAGCCCCGATTGAAATCGTCGTACAATACATAGATCCTCTGGAAGTGATTGGATCAAGTAACAAGAGCTACAGTCAGTCCAATCCACTGAATGATGTGGACAGTGCTAGCATTGTATGTAAAGCTGAAAATAGTGTTGGTGTACGAGAGaggacattttatttttacagacaGCCAATACTTTTCAAGGAAACGTTTACCGGGCAGTTTAGAGTAACCAACCAAGAATGGCAGGATGACCTTAAAGATACAAAATCAGCAGACTACAATGATCTTAAACAGAAATGCATCAAAATATTAGAAGCTGCATACTCAGGTGTACAATATTTGGCTGCCATAAACATTAAGGATTTCATCAAGGGAAGTATCATAGTGCGGTTTGAGCTCGAAGTCATTGGTAAAGTACCTGATCCACTGCTGCCTTTGAGAGAGTATATCAAAAGACAAGGAGAAGAGATCAATGGCTTACAGATAGACTACAACAGCATTCAGAAATCAAATGATCAAGAAAATACGCCGATTCCATGTAAAGGGGACAACAAGACACTAGTTACAGTTCTTGGAGCCCTGTTTGGTTTGTCAATTGTCCTTATCATCATACTTAtagtgggattcctgtggttaCGTAGAAAAGATTCAAAAGGAAATTCTGGGGAAACATCGAACACAAGTGACAAGAAAGGACAAATGAACGACATCTCACTTCAAGAAACAAGTTTTAATGCCACAGATAACGAAACACCAAATGTGCCAGAATATGAACCAATAGGAAGGCGAGGATTATCGACGAGTAATGCAGGCATCCCTGAATATGAAGCGGTGACAACAAGAACACAGCTGTCCCAACCACATTCTGGTGTACGGACGAAAATCCCCATGCCTCAGTATGAAAGTGCAGATCAACATGGACAGACAGAGGCTGTTTCAAATCCACCACCAGTCACCTATCAGACCATCCAACATTGTACTGGTAACTACGATTCACTGAGTCCTTCAACACGGCTGCCCCATAAGAGTGCAGTAGTGccatccacaggaagcccaacacGTACAGGAGAGTACCAGGCCCTTCAACACAAGGGTGTGTCTCCACAGTACCAGTCTCTGGATGACTTGAGCAAATGTTGAGTGAATATGGACCAAAAGAGAACAGTATTGATGAGGCAATGCCTTATGCTTTTAAATGCTACTAATAGAGTAAATGATATGCGGGACATCTGTACCATTACTGATATCACACTCACTCCTCTATCATAAAAGATACACTTGCAATTTTTATCacatttttcactttttttggttcttttaGACACATTGATCATACTAGACTAGTCTTGTTATAATCAAGTATTAAATATTATCAATCAAGAGTGAATAAGGACCAAACGAGAACAGTATTGATAAGGAATTGCCTTGTGCTTTTAAAAATGCTACTAACAGGGTAAATGTTATGCAGGACACATATTACTGGTATCCGTTACCTTTACTTCTCGATTATTAAAGATGCACTTGCAACATAATCTGTTCACATTTTGCTATTTTCATCGGTTCTGTTAGACACATTGATCATACTTAAAGGCAGTCTTGTAATAAACATGTAAATCATACATATATATCATATGCAGATGCAAAGCTAATTAATTTCAGTACCAGGCTCCGATATTCGTCTTCGGCCAGTGATTAGGCAGCAGCCATAACTGACTATTAAACTGCTCTACTAGACGGACGTTCACTTGAAGATTATTGAAGACTCGTAAACTAGACGAGAGTTTTTATAATCAGAAAAATGAACGGGCCATTGATTGGTATGCCTCATATATAACCAGCTTTGTTTATATCCTGTTCTGCATTCCAAATTTAGTGTAGATAATGTAGTGAACTGATGCGTGATTTGTTTAATCGTTCTGCGCAATATCTTTAAGCTAAGAAGTCCCAAGTTACATATATCCATGAAGTGAATTGAAAATTAGTATAGCGTGACCTCCAGATAGCTAAAaaagtaatatatataatataagtgGCGTGTTGCAACGATATTCAACgaattcattaataattcatgaggaaagcacaacagaaatcatgaCCGTGAAGAGGTTTATAATTCTGATGCAGAATCATGtttat

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012033 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR051275 all species →	Family	Cellular adhesion and signaling domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11640 all species →	NEPHRIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0005911 all species →	Cellular Component	cell-cell junction	Interproscan
GO:0050839 all species →	Molecular Function	cell adhesion molecule binding	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06789	ASAM, CLMP; adipocyte-specific adhesion molecule	-	Signaling proteins	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.