Gene detail

Detailed information of ENSQPTP00000067442.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031572903.1, titin-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000079140

ATGGAAGCTTTACAATTACCAATCGTGTATATTCTTATTTCCTGTGTTTTCAGGGTATTGATTTTACTTCCGCCTGAAGCACATGGCATCATACGAAATGTTGGTCAAGATGTCGTCTTCATGTGGAACAGAACAAGTGGGAGCATAGTGGAAGTGAGATGGGGATTGGTGGATCCGGCAGATAACCAGGGAATAAAACCACAGTTCATATACGTCAACAAATGGGCCAACGTTGCTGTCTATAGCGCTGACTTGGATACCCCAGCTGCATCGAGTTATAAAGGAAGAGTTTATTACGTGGGAGACGTGCCTGCTGGTCATGCTTGGTTCAAAATAACAAACCTAAGTATCAGCGATACCAAGGAATATGCTGTTAGCATACTAGAAGGAAGTGTTTACACGAGGTATAAAATGAGTGTGACTGTGGCAGTAACTCCCAAGTTTCAGCCACAGCCACCACCAACAAAGAATATAGCAGAGGGCCAGGATTTGAGTGTGCCTTGCATTGCTGTTGGACAACCAAAACCCAACGTCAAATGGGTACAGATAGTAGGTGACGTCACCAAGAGTACAGGAACAGGAAGTACTACACTGAGAATACCAAACATTAGAAGAGATCAGAATGGGACGTACGAGTGTCAGGCCAGCAACAACCCCAATGAGAGACCAGTCACTGCACAGACTGTTGTGTCTGTTTATTATTCTCCTCAAAGCAGTGTCATTCTTCCAAGTATCACAGTTGTACACGGTCACGTTATCGTACTCAGCTGTACAGCAAATGGTTATCCACCACCATCCATATCATGGACAAAGGCTGATGGTGTCATCAAAGATGGTCACACAGTAGCTGGGGGAACACTTAGAATACCTGATGCTATCAAAACAGATGCTGGCAAGTACATATGTACAGCAAAGAACACCTATGACAGGAGGGAACACACTGACAGTGCAACTGCAACTGTCATAGTAAAATACCAGGCTTCTATCATCTTCGACAAGTTCATAAATAGAACAGTGAACGAGAGCGACTCCCTGAGTATCAAGTGTGATGCAGATGGAAACCCACCACCAACCATCAAATGGAAGACACCGTCAGGTTCTGTCCACAATGGGAATGTCTACACCATCCCGTCAGTCAGAAGATCACATGCAGGGACATACACGTGTACAGCTAGTAACGGGATAGGAAGAGAAGCAGTGGCCAGAATACAAGTTACTGTGCAGTACAAACCGGCGATAGATTTATCAAAGTCTTCTTTAAGTTCAACGTCATGGAATGGCAACAGCATTCGTCTGGGATGCTTAGCAACTGCTTTACCTGCACCAAGAATATCATTGTACAAACCAACAAATCAGCAGATCACTACAGGTGTCAACATTGTACCCGGGGGTAGTGAGGTAACAGTATTGACAACTGCTGACCAAGGGGACTATGGACAGTACAAGTGTCGTGCAACAAACATCCTGGGAAGTGATGAATACCTCATTAATGTTACTCGACTGTTTACCCCAGGTCCTCTTACTATAACGATAACCGAGATTGAAGCATCATCCGCAAATGTGAGATGGACCAAACCCGCTGATGATGGTGGAAGTCCTGCCAATGGTTACTTACTGGAATCTGATTCCCACATCTTTGTAAGGACAATTGACACATATACCGTACTAACAGGCTTGAAGAAGGACAGTCAGTATAGGGTTGCTGTATATGCTAAGAATGATATTGGTTATGGAGTGTCATCAACCAAGATGATCACTACCAAGAAGACAGGCAGACCAGGCATTCCAGAACTGTTGACTTCCCTACTCATAGAAACGGAATCTAAAAGAAAAGTTCTTCTAAGGTGGAAGAAACCTGATGACAATGGAGCAACGATATCACGTTACACTATCTACATGAAAGAAGAAAACGAACAATCTGACTGGAATAAGATAGAGGATGTCAAAGATTCTCTTCTATTGGAATACATCGTGGGAACGACAATTAAATATGGAAAGACATACAAGTTTACAGTTACTGCGTGGAACAAATATGGAGAAAGCATCAAGGATGAACGTAATGTTAAGACTGTAAATACTACAGCAGATAAGACTGCATATGCTAGTGGTAAATCAGTCAACAGCTGTCCAATGGGAGGCTCGAAGTACATCACCACTGTTCTTGGTGTCATTATTGCAATTCTCGTTCTCTCTCTTGGTTTGAATTTACTGCAATTTCTGTGGTcgagaaaaaaaggaagattACCTTgtagaaaacaaaagcaagGTAACCAAAGAACCAAAAAAGCAGCGGATGAGGAGATCTACTCTaACGATCTTGAGATGGATAAGAAGGTGGTATCCGCCGTTACAACATCACGTCCACAGCCGCCTAGCAATACAGGACCAGAATATGAAACCATACAACAGCTAAATGAGATTGCAAGTCCTCAAGAAGAAATTCCTTCTAATCATCCCAAACATTATGAGGGACTCAATCTCCCAAATACCTCTGAACAAGGTGTCCAAAGACCAGTGTACGAGCCACTTCGAACGAGATCAGTGGAACGCAATGTGCGGCTTGATGATAATAACGAGCAACAGCCATATGAACCCCTAAATATAAGAAACCAAGATTCTACTTATCAATCCCTGCAGACTAATAGCAGGGAGTCGGCCATATGA

Transcript

ENSQPTT00000079140

AGTTTTCCAGAGAGCTTACAATGAGTTTACAAGATGGAAGCTTTACAATTACCAATCGTGTATATTCTTATTTCCTGTGTTTTCAGGGTATTGATTTTACTTCCGCCTGAAGCACATGGCATCATACGAAATGTTGGTCAAGATGTCGTCTTCATGTGGAACAGAACAAGTGGGAGCATAGTGGAAGTGAGATGGGGATTGGTGGATCCGGCAGATAACCAGGGAATAAAACCACAGTTCATATACGTCAACAAATGGGCCAACGTTGCTGTCTATAGCGCTGACTTGGATACCCCAGCTGCATCGAGTTATAAAGGAAGAGTTTATTACGTGGGAGACGTGCCTGCTGGTCATGCTTGGTTCAAAATAACAAACCTAAGTATCAGCGATACCAAGGAATATGCTGTTAGCATACTAGAAGGAAGTGTTTACACGAGGTATAAAATGAGTGTGACTGTGGCAGTAACTCCCAAGTTTCAGCCACAGCCACCACCAACAAAGAATATAGCAGAGGGCCAGGATTTGAGTGTGCCTTGCATTGCTGTTGGACAACCAAAACCCAACGTCAAATGGGTACAGATAGTAGGTGACGTCACCAAGAGTACAGGAACAGGAAGTACTACACTGAGAATACCAAACATTAGAAGAGATCAGAATGGGACGTACGAGTGTCAGGCCAGCAACAACCCCAATGAGAGACCAGTCACTGCACAGACTGTTGTGTCTGTTTATTATTCTCCTCAAAGCAGTGTCATTCTTCCAAGTATCACAGTTGTACACGGTCACGTTATCGTACTCAGCTGTACAGCAAATGGTTATCCACCACCATCCATATCATGGACAAAGGCTGATGGTGTCATCAAAGATGGTCACACAGTAGCTGGGGGAACACTTAGAATACCTGATGCTATCAAAACAGATGCTGGCAAGTACATATGTACAGCAAAGAACACCTATGACAGGAGGGAACACACTGACAGTGCAACTGCAACTGTCATAGTAAAATACCAGGCTTCTATCATCTTCGACAAGTTCATAAATAGAACAGTGAACGAGAGCGACTCCCTGAGTATCAAGTGTGATGCAGATGGAAACCCACCACCAACCATCAAATGGAAGACACCGTCAGGTTCTGTCCACAATGGGAATGTCTACACCATCCCGTCAGTCAGAAGATCACATGCAGGGACATACACGTGTACAGCTAGTAACGGGATAGGAAGAGAAGCAGTGGCCAGAATACAAGTTACTGTGCAGTACAAACCGGCGATAGATTTATCAAAGTCTTCTTTAAGTTCAACGTCATGGAATGGCAACAGCATTCGTCTGGGATGCTTAGCAACTGCTTTACCTGCACCAAGAATATCATTGTACAAACCAACAAATCAGCAGATCACTACAGGTGTCAACATTGTACCCGGGGGTAGTGAGGTAACAGTATTGACAACTGCTGACCAAGGGGACTATGGACAGTACAAGTGTCGTGCAACAAACATCCTGGGAAGTGATGAATACCTCATTAATGTTACTCGACTGTTTACCCCAGGTCCTCTTACTATAACGATAACCGAGATTGAAGCATCATCCGCAAATGTGAGATGGACCAAACCCGCTGATGATGGTGGAAGTCCTGCCAATGGTTACTTACTGGAATCTGATTCCCACATCTTTGTAAGGACAATTGACACATATACCGTACTAACAGGCTTGAAGAAGGACAGTCAGTATAGGGTTGCTGTATATGCTAAGAATGATATTGGTTATGGAGTGTCATCAACCAAGATGATCACTACCAAGAAGACAGGCAGACCAGGCATTCCAGAACTGTTGACTTCCCTACTCATAGAAACGGAATCTAAAAGAAAAGTTCTTCTAAGGTGGAAGAAACCTGATGACAATGGAGCAACGATATCACGTTACACTATCTACATGAAAGAAGAAAACGAACAATCTGACTGGAATAAGATAGAGGATGTCAAAGATTCTCTTCTATTGGAATACATCGTGGGAACGACAATTAAATATGGAAAGACATACAAGTTTACAGTTACTGCGTGGAACAAATATGGAGAAAGCATCAAGGATGAACGTAATGTTAAGACTGTAAATACTACAGCAGATAAGACTGCATATGCTAGTGGTAAATCAGTCAACAGCTGTCCAATGGGAGGCTCGAAGTACATCACCACTGTTCTTGGTGTCATTATTGCAATTCTCGTTCTCTCTCTTGGTTTGAATTTACTGCAATTTCTGTGGTcgagaaaaaaaggaagattACCTTgtagaaaacaaaagcaagGTAACCAAAGAACCAAAAAAGCAGCGGATGAGGAGATCTACTCTaACGATCTTGAGATGGATAAGAAGGTGGTATCCGCCGTTACAACATCACGTCCACAGCCGCCTAGCAATACAGGACCAGAATATGAAACCATACAACAGCTAAATGAGATTGCAAGTCCTCAAGAAGAAATTCCTTCTAATCATCCCAAACATTATGAGGGACTCAATCTCCCAAATACCTCTGAACAAGGTGTCCAAAGACCAGTGTACGAGCCACTTCGAACGAGATCAGTGGAACGCAATGTGCGGCTTGATGATAATAACGAGCAACAGCCATATGAACCCCTAAATATAAGAAACCAAGATTCTACTTATCAATCCCTGCAGACTAATAGCAGGGAGTCGGCCATATGACAATAAAATTAGTTCAAGAATATTCAGGTTAACGTGAAATGAAAGAATTTATAAAGGGAAGTGAAGAGTGCTATAGCCTTGAATCATCTGGAATCAGTAAACATACCCTTTGATTAACCTATCAATCCCTGCAGGCTAATAGCAGTGAGTCTGCCACACAAACATGGgctgaaatattgaaaataattgtAAATCAAATTACGTCTTGAAATACAACATAAACAAGGATATATgttcttgaaataaataaacaacgAAAAGTTTGATACAAAGACAATCATCAACAATACATAAATATAAAGTTTCCATAAGCCAATATTCATCAGCCATTTTTTAATGAACCCGTTTTTGTTGGTACTTACAGAGTCAAGTATG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P13590	Neural cell adhesion molecule 1 OS=Gallus gallus OX=9031 GN=NCAM1 PE=1 SV=3
P13595	Neural cell adhesion molecule 1 OS=Mus musculus OX=10090 GN=Ncam1 PE=1 SV=3
P13596	Neural cell adhesion molecule 1 OS=Rattus norvegicus OX=10116 GN=Ncam1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000023 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR051427 all species →	Family	Nectin and Nectin-like	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23277 all species →	NECTIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005912 all species →	Cellular Component	adherens junction	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007157 all species →	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000067442.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.