Gene detail

Detailed information of ENSQPTP00000068424.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031552769.1, cytoplasmic protein NCK2-like [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000080237

TGGGTGTATTGCAACAGGAAACCGCTCGAATACACCATCAAACGTACAGGGGAAGAAACATTTTACTCTGTTAAactcccccccaaaaaaaccaCAAGACGACGGTGTATGGTCAGCTAAGAGATCAAATACAGTAGAAGAAAACATGTAGAGTAACCAAGAACCTTGGTGTCCTTAAAACGAGTCGTTTACCGATGCAAAAAGCCGAGAAAGATGGGGGACGAGTCCATTGCTATTGcattatatgaatataatGCTCAACAGAAAGAGGAACTTTCTatcaagaaaaatgaaaaactgacCATTATTGATGATTCTCAAACCTGGTGGAAAGTTAAAAACGAGAGAAACCAATCTGGTTATGTCCCTTCAAATTATGTTGATAGGAAAGGGCCTAAAAAGCAACCTGTACAAATATTGAAGAATATATTTGGTAAAGGAGCAAAGAAGGGTCAGTCTGACAGTAATGGCTATGACAATGAGAGGAATCAATATTGTACACCAGAATCTGTCCTTATTCCTCCTCATACTAAAGCTGCAATATGTCAAGTTAAAGCCAAGTTCAGTTATAAACCAAGAAACAAAGATGAACTTGAACTCAATAAGGGAAATTTAATTGACGTTCTTGAAAAAGAACACGATGGTTGGTGGAAAGGACGAAGTGGTAATAATGTTGGATGGTTTCCTTCCAATTATGCCGAAGAGGATACTTTGAGTGAGAATCCGAATTTTAAAGTTGTGGCTTTGTATCCGTTTAGCTCCTCTAATCCAGAAGAACTCAActttgaaaaagatgaaatattAGACATTATAAGGCAGCCAGAAGGGGATCCTGACTGGTGGGAGGCCAAGAAAAGTGATGGAAAAACTGGGCTTGTACCCAAGAACTATGTTAAGACTTTGTCAGAAGATGCTCCAGCAAGACCTCCTTCTCAATCACATCCTACGAAAAAGCTGCCACTCTCACCAAATGACTCAGCTCAGGCTTTCCAAAAAGTTTTGCTCCCATCACACAAAGCTCTCTCATTTGGAAATGAGGAATGGTTCTGGGGACAGATTTCAAGAGAAAATGGTGAAAAGCTATTGGGTATACATGGTGATAATGGAGATTTTCTCTTACGAGAAAGTGAAACTCGGGGAGGTGATTTTTCTGTGTCTATGAAGGCTCCTGACAGGATCAAACACTTTCGAATCCAAACCCTGGATAGTGGATATAAGATTGGTCAGCGCACGTTCGATTCTCTTGATGCCCTTATCGAACATTACAAGAAATCGCCCATCTTTACTAATGAAAAAGGGGATAAAATGTACCTTGTCAAGCCTGTTGTAATGTAAAAAATTGGAataattagaaaaataaatgactGGTCTATTAGTTAGctcaaacatttttttacttagtttATATATGTGGATAGTAAAGATACATCAGGGATGTTCCTTAAAGATGCTGTGGATAGCTATCAATGTTCTTTTAATCTGAATGAATCTAATCAATTCTGGATGTATGGCTTCTCTTTGGACTTAAATATTTAGATGCACATTTGTAAATCAATATACAACTCTATGTATGTCACAGTACTCTTTCACTTTCTAACAGGTTATAGCATAATAAAGGCAAGGAAGCACTTTATGACTTGTTAAATCCAGGCTTATTTAACGCTcgagtggttttcataaactcGTGAAATCCACTCTAGTCACTAATTATACGACTTTGTTTCACAGgcaaagtaaaatcactctagcTATACTGTCAACTTTGTTTCGCAGGCCAAGGAAAATCATTCTAGTAGACTAATAGAGCTTAAACAGATTTTACTTTGCCCttgaaaggaaaacaaaagaaatctatGGAATTAGTATCTATGGCAGAACCTATGCAATAAATACTTGTACTTGTTATCTTTTCATTGGCcaagtaaaaaaattactcTAGATCTTATTTCCattcttttccttttgtttgtGTCTGTGAACTCAGACATCCCAACAGCTTGTTgtgacatcagttttttggAATGCCAGTCATTTCGAGACAGGTCGACCAAACGTTACCAAGTTTTCCGTAAATTATTGACTTGAAAACTCGTCAATCGACAACAAGAATGATCAAACTACCAGATCTTAGTCAGAAAACTatgattttttccaaaatctttATCAGAAATTTACATCTTCTAAACTTAATGAAGAATTTTTAGATAAACATGAAAGGGGATTCAAGTTTAGAGAGAAACACGCAAACGACTAGCCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43639	Cytoplasmic protein NCK2 OS=Homo sapiens OX=9606 GN=NCK2 PE=1 SV=2
O55033	Cytoplasmic protein NCK2 OS=Mus musculus OX=10090 GN=Nck2 PE=1 SV=1
P16333	SH2/SH3 adapter protein NCK1 OS=Homo sapiens OX=9606 GN=NCK1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004263 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR051184 all species →	Family	Tyrosine-phosphorylated adapter molecule	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19969 all species →	SH2-SH3 ADAPTOR PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0030971 all species →	Molecular Function	receptor tyrosine kinase binding	Interproscan
GO:0035591 all species →	Molecular Function	signaling adaptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07365	NCK1; NCK adaptor protein 1	-	Pathogenic Escherichia coli infection	ko05130	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.