Gene detail

Detailed information of ENSQPTP00000068629.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031559273.1, nuclear factor related to kappa-B-binding protein-like isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000080460

ATGGCGGAAGAAGCGAGTCAAGGAGAAGAGATCTGTGACTTCAATGGCAGTAAAGTGCATCTTCCAATTGATCTTATAGAATCGCCTGAGATTTTCTCAAAGATCGTCAGTCTAGACACCTGGAAGAATGTCCTCACtcctgaaaacaaaaaacacctTGAGAAATTCCTGCCTCAGTTACCGACAGATTATCCTCATGCCCAAGAAGAAAATCTCAGGGCTCTCTTTGAAGGAGAAAACTTCAAGTTTGGAAACCCTATTGAAGATTTCCATACAAAATTAAAAGATGGTTAtttttatcctgatgttgtggAATACAAAAAGCTTTGCcaaaaagcaaagaagaaagaatacAAGGAAATTCTTGATCAAGTAAGCAGACAAGGGCCAAATGATCCAATACGAACAAGAGGGAAAGTACTCTCTGAAAATTGGTCATCCTTGGAGCATGGGGTACAGTCACGTTTCAAAAAaattattcatgaatgcAAGCAAGAATGTGAGGATCAAGCCATTTCatcagatgaagaagaaagatTTCTTCTCCCAGGCCCTTTCGGGTCACTCAGGTACCCGATGCCATTTCCTGGCCACCCAGCTGGGCTGTTTCCAGGTCATCCTGGGTATCATCCAATGATACCATCCATCCCTGGCATGCCGTATGGGTATCCTGCCTTTCCGTTCTCATCCCATGCACCTCGCCCTCCTCTGACCCCTTCGAACATCAACATTACAGAGAAAGATTTTCAGCAAATGCTTCAGAAACATAAGAAGAGGCGAACCTGTAACGAGGATCACCCTGAACTAGACACAAGATTTACTGCTTTGTCAGACATAGTCTACAGAACTAACCCATCAAAAAGACCTTCAAAAACCTTTGGTAGTAAGACAAAAGATGTTCCACAAACACAAGTTGAGATGAACAAGAAAAAGGACAAGAAAGccaaactaaagaaaaaactaaaacaGAAACTACAACAAAAGCAAGAAAGGAATCGAACACAAGCAAAAAAACAGGATTCAAAGACTGGTCCTTCTGAAGCTGGTTCTACAAACTTaCCACCTCCGCCAACAGGAAAGTTTTCCAGTTTCTTCAGTTTGCTAAAAGAGATATTCTACAGCATGCCCGATTATAAAGCTAGCTTACACAAGATTGAAGAACAAATTGAGGCTTGGCAGTGCTCGCCATCTGCATCTCTGAGTACCTGGAGTGATGACCAGTCAGACTGGGTCAAACTGGCTTACTCTTCCCTTATGTATATTTCTGGAAGTTCTGGAGTCACACCAACAACGTTTGTCCCATTGGTTGATTTCAAAGAACGACCTCAGCAATGGAAGTGGATTGGTGCTTTGCGGGATTCTGATGAGGAGCTCACTCAGCTGTGCCAGGATTGGCTGAAGGTGAAGGATCAACTCTCCATTAAAAAGGCTACTGCGGAAGGTGGAAGCACAGTCAACGCTCCTGAAGCCCGAGTGAAGACTGATTACATCGTAAGACCCAGCACAAGCACGGAACAAGATATATTCAGAGAGCAAGAACTGAAGCGTTACATGAACCCACATAAAGCTTACACCTACCACATGCACGGGTTTGAGTCTGTTGTTGGTCCTGTCAAGGGAGTATTTTCCAAGGAGACCAACTTGAACAAAGCGAGAGAACATTCTCTTCTGGTTTCCAATCGTCCACCTTTTGTTACCATCCTGACACTCGTACGCGATGCGGCAGCCAGGCTACCGAACGGAGAAGGCACACGAGCAGAGGTCTGCGAACTGTTAAAAGATTCACAGTTTTTAAACAGAGATGCAACAGAAGCCCAGATCCACACTGTAGTTAGTGGTGCTCTTGATCGCCTTCATTACGAGAAAGATCCCTGCGTCAAGTACGATAGCAACAGGAAGGTCTGGATCTATCTTCACAGAAACAGAACGAAGGAAGAGTTTGAGAAAATCCACCAAGCCAACGCAGCCGCAGCCAGAGCCAAGAAGATGCAGAAACCGAGAATGCCACGGCATTCCAAAGCCAAGGAAGAGAGCTCTACTCCAGTATCAGAAACAGTAGACCCAAGCGCCGCGCAAGCTGTTCCTTCCCCAGGCAGCCAAGCGGCGCCCGTACCAAGCAAACCTATCGAAATGAAGAAACCAGGAATTAAGATTAAGATTGCTGGGAACACGATAAGTGGTCACCCTAAAGTCTCTGTTATAACATCTCTCACGGGTCATGTAGATGAGGAAAAGACTCATTCTTCATGGgaaaaagaacaagaagaactcAACACTACCACCCAATCTGGTCAAACTACACCATCTCAGATAGGAGCCAAATCCAGATTGAATACCTCCGATTTGAACTCTAAATCAAGTATTTATTCTCAGTCAAGCGTTCCCTCTCCTGGTCTCAGACACACGAGCGCTTTGAATTCCCAAACGAGTGCTCTAAACAGCGCCAGCTTGCTCTACGCACCAAGTGGTGACGACCCGGTTGATGTGGTGAGCGAGACACGTGAAGAAAGTGGCAGTGAGGCATCTGTGTCAAGCAGTAACAGTGAGAATGAAAGCAGTAGTGGAAATGAAAGTAGTAGTGAAGGAGAAGAATCCGCTGATGAGCCGACGGGAGGCAAAACAAAGCATGGAGCACTAAAACTCCTCCACGATGAGCAGGAAGATGCAGTAGACAGTCCACAATCAACAGAACACAGTTTTAAGCTACAAAGCCAGAATGAAAGGGATCCTTTCCCGCAACCGTACGGCTTTACGAATGCATCGAAGGAAGATAATGAGTCAGATGCCGACGAACAGGATGAATCTGGAAGCAGTGATGGTGGTGAAGGCAGTGAAAGCGAGGACAGCAATGACGACTAG

Transcript

ENSQPTT00000080460

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6P4R8	Nuclear factor related to kappa-B-binding protein OS=Homo sapiens OX=9606 GN=NFRKB PE=1 SV=2
Q6PIJ4	Nuclear factor related to kappa-B-binding protein OS=Mus musculus OX=10090 GN=Nfrkb PE=1 SV=1
Q6P4L9	Nuclear factor related to kappa-B-binding protein OS=Xenopus tropicalis OX=8364 GN=nfrkb PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002751 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14465 all species →	NFRKB_winged	NFRKB Winged Helix-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025220 all species →	Domain	NFRKB winged helix-like domain	Interproscan
IPR044867 all species →	Domain	DEUBAD domain	Interproscan
IPR038106 all species →	Homologous_superfamily	NFRKB winged helix-like domain superfamily	Interproscan
IPR024867 all species →	Family	Nuclear factor related to kappa-B-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13052 all species →	NFRKB-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002020 all species →	Molecular Function	protease binding	Interproscan
GO:0031011 all species →	Cellular Component	Ino80 complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11671	NFRKB, INO80G; nuclear factor related to kappa-B-binding protein	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.