Gene detail

Detailed information of ENSQPTP00000068880.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031554758.1, muscleblind-like protein 2 isoform X3 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

Transcript

ENSQPTT00000080743

AACTGGCTTATTTTAAGAATGCGTgataaataaacttttttgGTTGGCTGTTTCTTTGATCCATCTAACCCTGACCCTCACTGATGACTCATTGTTATGTAATTTGAGCCAGCGATTTTCAATCAATGGAGCATGCGTGAAGGGGTTTTTTTCTGTCGTCAGAACGAGGCTATAGAAATATCCGGAAAAATCTTTGGTCTTTATTGCATCGTATTTAGAATTGCtccgaaaaaaagaaaaataatatctGTGTTCTCGCAGGCCTTACCACGGATTTTACCTCCCAGTTTCGCAGGCATATGCCAAGCTCTCCGAGCATGATTGTGCCAATAATGGGAAAAGATTCGCGCTGGCTACAGGTCGAGGTTTGCCGAGAGTTTCAAAGAGGGAAGTGCTCTCGAACAGAGGAAGAGTGTCGTTTCGCGCATCCACCGGCTCATGTGGTCATTCACAACGGCCGTGTTACGGCATGCTTCGACTCTCTAAAGGGTCGATGTCAGAGGGAAAAATGCAAATATCTCCACCCACCAAAACATCTTAAAGCACAACTAGAACACAATGGACGGATGctacaacagcagcaacagatGGCATTACAGCCACAAATGCTTGCTCCTTTGACACAACAAATGATGACAAATCCTTCATTATTACCAACATGGCAAAGTCTGACAGTTCCGACATCAAATGGCACATTAATCCATCAACCTGTAGCATTCTTAGCTGATCCTGGATTAGCAGGGGGACCAAGACGGCTTGACAAGTCGGATAAGCTAGAGGTATGTCGAGAGTACCAAAGAGGAGCATGTTCCAGAGATGAATCAGAATGCCGCTATGCCCACCCACCCAGACATCTGAATATGGACACATCAGATGGGATGGTTACAGTGTGTATGGACTTCATAAAAGGAAAATGCCAGCGCGAGTCATGTAAATACTTCCACCCTCCTTCACACTTACAAGGAAAAGTCAAAGCAGcccagcagcaacagcaacagatGTCATTACAATCTGGCATGTCTGTTGGTGAGCCATTAAGAAAACAGGCAATGGAAGTTCCTATCATCGTGCCTGGTGGAATCTCTCCTGGCTTCCCTCATCAAGGTCTTACAACAATGCAGTTTACAGGGCTACCTACAGtTCCAATCATGGGATATCCATTGGGATTACCTCAACAAACACAGCAGTGGCAGCAAGTGCCATCTGCTAACTATATGCCCGTGGAAATGGCAACACCACCTCCTACTCCTCAAAATATGTCACCACCTCAACCTCAGACATTTCATCAGCCGCAGGTTCCCTCTCCACCACAACCAATGTATGAACCATATCAGTACCAGATGCTCACCCCTCAGGGGCAGTGTAACGACATGCAGTACTGTAATGGGTATAATGGGTATAATGGGTATAATGGGTACTACTACACCTTAGCTCCAGGGCCTCCAGTTGACCCTGGTGCTTATACGAACTAGGTGCTGCATGTTGACAGTATGCGGAGTGTCCCAAGCTGGAATTGGGAGTGAATGAATGGCAATCTTGAGGAAGGTGATCATTTCTTCTAAGGTGTTAAGGTTCCTTAGAAAGATCTCTTACCATCAATGGTAGAAAATTAAAGCACAAATGCAACTTCGTAACTTAGTTAGAGATTGCCGTGGCCCTGGAATCTCGACAAAAAATTCTGAGTCTATTCAGACTGAAATTAAGAAGATTCCACATTTTTGTTGGCTCTTCTCGACTAAGTAATCCATTGTTGTCACTACTACACATGCAGCAGCATCTAGATAGAAAGGTTATCCAAGTTTGGTGTGGTTGCTCTGGaaagaaactgaaaaaaatggTTGACAGAAAGATGAAATATAGCAGATATAGGTAAAAGAGGTGACGAGGAGGAGTCAATGAGGCACCTTGTGTAACTCTGGACTAGAAATATATGGACAAAAGTTGTGGTACAAGGAGGAAAAAACTAAGAAAAGTCGCAGAAAGACAGATGGAATTTTACAGAATGATGGAACATTTCACACTTGGGCATGGTAACCTTGAGTAGAATAAGTGACTATtagaatataatataaatattgtgTAATATTATCTCATCACTCTTATTTAtctaattaattaaatatccTTCAGTTCATGACTCATCATCAACTAATCCAATAAATTCACTAGTTTGTGTGCAGTAACATGGATTTCATTTGGGTAGGAAAAAATGATCTTAACATAAATATAATTACCGAGTAGATGTATTTCAGATGTGGGCGTAATTATGcaaatctttctttttgtggcctgtacttttacttttttttgtaGTTGTTGCTCTCCTTTTTTGTATCTTGTGCTCTGCATGCTTTTCCACATGTCTTTCACTTTGTAACCTTTAACCTTTGCTCTCTGCACCATGTCCTGTGACCTGTCCCTATCGTATTCTcattatacacctatttcagaaatcatTGTTGCACCAAagc

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JKP5	Muscleblind-like protein 1 OS=Mus musculus OX=10090 GN=Mbnl1 PE=1 SV=1
A0A8I6B1J2	Muscleblind-like protein 1 OS=Rattus norvegicus OX=10116 GN=Mbnl1 PE=3 SV=1
Q6Q2B2	Muscleblind-like protein 2a OS=Takifugu rubripes OX=31033 GN=mbnl2a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002234 (this species only)
Transcription factor family	zf-CCCH · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14608 all species →	zf-CCCH_2	RNA-binding, Nab2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12675 all species →	MUSCLEBLIND-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0043484 all species →	Biological Process	regulation of RNA splicing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14943	MBNL; muscleblind	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.