Gene detail

Detailed information of ENSQPTP00000069034.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031562166.1, beta-galactosidase-1-like protein 2 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

CDS

ENSQPTT00000080917

ATGACGATGGGGACTTCAATTCGCCTTCATAAAAAACCTATAATATTTCTCATCTCATTATCACTGTGTTTTACGATATGGATGTCATATGGAAGAACGAAGAAGACATCTTTAAGCCGGTATGGCAAAAGCGAAGGATTGAAAGCCGAGGGACCAGGTTTTACATTAGATGGCAAACCGTTCACTATCTTGAGTGGAGCAATGCACTATTTTCGCATCGTTCCTGAATATTGGGAAGACAGACTTTTGAAGCTCAAAGCTATGGGACTTAATACTGTTGAAACTTATGTAGCCTGGAATTTACATGAAGAAGTAAAAGGAAAGTTTGTTTTTGATGGACAACTTGATATTGTcaAATTTGTAGAAAAGGCACAAGAGCTTGGTCTCTATGTTATCATGCGACCTGGTCCATATATCTGTGCTGAATGGGATCTAGGAGGACTGCCTAGCTGGTTACTCAGAGACCCCAAAATGAATCTAAGGACTTCATACAGACCTTACACTGATGCAACAGGCAGATTCTTTGATGAATTGATTCCAAAACTAACACCTTTACAGtatTCGAAGGGTGGTCCTATAATAGCATGGCAAGTGGAAAATGAATACCTTAGCTTTGGAAATGATTCTTTTTACATGCGCCACCTCAAACGTGAAATGACCAGGAGAGGTGTTTCTGAGCTATTGATCACTTCAGATGGCTTATATCAgatgaaaaaagagaaaaagtttcATTTATCTGGAGTTCTGAGAACTGCTAATTTCCAACGGAATGAGACACATGTTCTCAAAGGCTTGAAAGAGTTACAGCCCAACAAGCCTCTAATGGTTACAGAGTTTTGGTCTGGTTGGTTTGACCACTGGGGTGAAGATCACCATATTTTGTCCCTAGACAAAACTGTCCAGCGAGTAACAAATATTCTTGCTATGGGATCATCTATTAACTTTTATATGTTTCATGGTGGTACAAACTTTGGTTTTATGAATGGAGCCAATGCTGACAAGCATGGTCGTTACAAGCCAACAGTAACTTCATATGACTATGATGCCCCAGTATCAGAAGCAGGCGACATCACTGATAAATACAAGGCACTCAGAAAGGTTATCCTGAATAACGTGCCCTTCAATTCTCTTCCAAAACATATGCCAAAAAGTATACCTCCAAATACAGAGAAAACAATTTATGAACCAGTGGAAATGCAGGAGTTTATGCCACTCAAAACCTTACTCAAATATGTGACATCCGTTGAAAGTGAATACCCAGTCCCCATGGAAAGTCTACCCATCAACAACAACGGTGGTCAAGGCTATGGTTACATCCTGTACCAAACAACCATACCACCCAGTGCAAAGCAACTAAAAATTGAGAGCTATAGAGACAGGGCGAAGGTCTTCGTTGATTCCAAAGAACAAAATATTCCAGAAGTGATGGATTACAAGGGGAAGTATCTGAACGTAAATAAGACCAAAAATGTCAAAGCTACGCTAAGTTCTGACCAGGAACCAGGGGAGGAGAAGACACTGGAAATATTGGTGGAGAACATGGGTCGAGTCAATTTTTTGAAGAACATCAACACACAAAGAAAAGgAATTCTAGGTGAAGTTACCATTGACGGCAAGAAACACAAACGTTGGACCATCTACCCGCTTGACTTTAAGCCTAAAGTCATGGACAAATTAACCAACAAAATAGAATGGTCCTCAGTTTCTAAACGTACTGGACCAGGCTTATACAAAGGAAAATTCGAAATATCTGGTGAACCTAAGGACACATACCTTCTAATGAGTGCGTGGAAAAAAGGATCGTGCTTTATAAATGGTCGTAATTTAGGACGCTACTGGAATATTGGACCACAGAAGACACTTTACCTTCCAAAACCATGGCTACGCTCTGGAGAGAACACGATTGTTCTATTCGAGTTGGAGGGATCAATCAAAGAAGAGGAGTTTGAAGTGACGTTCGTCATGGAACCTCAGCTTGGAGATAAAATACAAGAAAGACACTGA

Transcript

ENSQPTT00000080917

TCAGGCCCTCTACAATATGACGATGGGGACTTCAATTCGCCTTCATAAAAAACCTATAATATTTCTCATCTCATTATCACTGTGTTTTACGATATGGATGTCATATGGAAGAACGAAGAAGACATCTTTAAGCCGGTATGGCAAAAGCGAAGGATTGAAAGCCGAGGGACCAGGTTTTACATTAGATGGCAAACCGTTCACTATCTTGAGTGGAGCAATGCACTATTTTCGCATCGTTCCTGAATATTGGGAAGACAGACTTTTGAAGCTCAAAGCTATGGGACTTAATACTGTTGAAACTTATGTAGCCTGGAATTTACATGAAGAAGTAAAAGGAAAGTTTGTTTTTGATGGACAACTTGATATTGTcaAATTTGTAGAAAAGGCACAAGAGCTTGGTCTCTATGTTATCATGCGACCTGGTCCATATATCTGTGCTGAATGGGATCTAGGAGGACTGCCTAGCTGGTTACTCAGAGACCCCAAAATGAATCTAAGGACTTCATACAGACCTTACACTGATGCAACAGGCAGATTCTTTGATGAATTGATTCCAAAACTAACACCTTTACAGtatTCGAAGGGTGGTCCTATAATAGCATGGCAAGTGGAAAATGAATACCTTAGCTTTGGAAATGATTCTTTTTACATGCGCCACCTCAAACGTGAAATGACCAGGAGAGGTGTTTCTGAGCTATTGATCACTTCAGATGGCTTATATCAgatgaaaaaagagaaaaagtttcATTTATCTGGAGTTCTGAGAACTGCTAATTTCCAACGGAATGAGACACATGTTCTCAAAGGCTTGAAAGAGTTACAGCCCAACAAGCCTCTAATGGTTACAGAGTTTTGGTCTGGTTGGTTTGACCACTGGGGTGAAGATCACCATATTTTGTCCCTAGACAAAACTGTCCAGCGAGTAACAAATATTCTTGCTATGGGATCATCTATTAACTTTTATATGTTTCATGGTGGTACAAACTTTGGTTTTATGAATGGAGCCAATGCTGACAAGCATGGTCGTTACAAGCCAACAGTAACTTCATATGACTATGATGCCCCAGTATCAGAAGCAGGCGACATCACTGATAAATACAAGGCACTCAGAAAGGTTATCCTGAATAACGTGCCCTTCAATTCTCTTCCAAAACATATGCCAAAAAGTATACCTCCAAATACAGAGAAAACAATTTATGAACCAGTGGAAATGCAGGAGTTTATGCCACTCAAAACCTTACTCAAATATGTGACATCCGTTGAAAGTGAATACCCAGTCCCCATGGAAAGTCTACCCATCAACAACAACGGTGGTCAAGGCTATGGTTACATCCTGTACCAAACAACCATACCACCCAGTGCAAAGCAACTAAAAATTGAGAGCTATAGAGACAGGGCGAAGGTCTTCGTTGATTCCAAAGAACAAAATATTCCAGAAGTGATGGATTACAAGGGGAAGTATCTGAACGTAAATAAGACCAAAAATGTCAAAGCTACGCTAAGTTCTGACCAGGAACCAGGGGAGGAGAAGACACTGGAAATATTGGTGGAGAACATGGGTCGAGTCAATTTTTTGAAGAACATCAACACACAAAGAAAAGgAATTCTAGGTGAAGTTACCATTGACGGCAAGAAACACAAACGTTGGACCATCTACCCGCTTGACTTTAAGCCTAAAGTCATGGACAAATTAACCAACAAAATAGAATGGTCCTCAGTTTCTAAACGTACTGGACCAGGCTTATACAAAGGAAAATTCGAAATATCTGGTGAACCTAAGGACACATACCTTCTAATGAGTGCGTGGAAAAAAGGATCGTGCTTTATAAATGGTCGTAATTTAGGACGCTACTGGAATATTGGACCACAGAAGACACTTTACCTTCCAAAACCATGGCTACGCTCTGGAGAGAACACGATTGTTCTATTCGAGTTGGAGGGATCAATCAAAGAAGAGGAGTTTGAAGTGACGTTCGTCATGGAACCTCAGCTTGGAGATAAAATACAAGAAAGACACTGAAGCAAACTTATCACCACAGAAGACACTGAAGCAACTTATCCCCAAAGAAGACACTGAAGCAACTTATCATAACAGAAGACACTGAAGCAACTTATCCCCACAGAAGACACTGAAGCAACTTATCCCCACAGAAGACACTGAAGCAACTTATCACAACAGAAGACACTGAGGAGCTTATCACCACAAGACACTGAAGCAAACATAATTTTTCAGGTTCTAAAATGGAATCTTGTTGGTATATTTTAGCAGTATAGTCCCTGAGCCAAGAATGGGCTATTGATTCATAGGCTATAGAGAGGATTagttgttttagtcaaatccacaATTATTCcatcaaatatatagatgaaaaatagttttcagataaagtttaaaaatttaattagTTTTGGTTTTTAAAGCCAACACTTTTCGCTACTAGTAGGAAATAACTTTTAGcctagtagtagctcatccaatcagaaagcagcaTTGTTGATAGACCgatagttggatttgactaaagtTTAATAGATTTCATATGGCTGTGAAAAACATGGCCATGTGAAATCTTTCAATTTAACAAAAAGTTACGACTATAGTTTTTAAAACGCAAGGCGTACAAAATacacatttattttaatagtGATATAATGAGAGTTTTAATTTGTTATAAATTCGTTATAATTTTAAATACAGTACATGCAAAGTTCATGAGCATGCACTCAGatatttggaatattttttgattgaaatTGCATATTTGATAGAGGTAGAATTTTAGGTCAACAGGCAAGGAAAATATCTAAAGGTGCAATTCCTTTTCCCCCTATTCTTACGAGGTCTTTTTGTCGCTGATATACACTTCACTAGCATGTTAACAATTAAATATACattaaaaaactaaaaatttcTAAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IW92	Beta-galactosidase-1-like protein 2 OS=Homo sapiens OX=9606 GN=GLB1L2 PE=1 SV=1
Q8NCI6	Beta-galactosidase-1-like protein 3 OS=Homo sapiens OX=9606 GN=GLB1L3 PE=1 SV=3
Q3UPY5	Beta-galactosidase-1-like protein 2 OS=Mus musculus OX=10090 GN=Glb1l2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000517 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21317 all species →	BetaGal_ABD_1	Beta-galactosidase, first all-beta domain	Domain	Interproscan
PF21467 all species →	BetaGal_gal-bd	Beta-galactosidase, galactose-binding domain	Domain	Interproscan
PF01301 all species →	Glyco_hydro_35	Glycosyl hydrolases family 35	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001944 all species →	Family	Glycoside hydrolase, family 35	Interproscan
IPR019801 all species →	Conserved_site	Glycoside hydrolase, family 35, conserved site	Interproscan
IPR048912 all species →	Domain	Beta-galactosidase 1-like , first all-beta domain	Interproscan
IPR017853 all species →	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR048913 all species →	Domain	Beta-galactosidase, galactose-binding domain	Interproscan
IPR026283 all species →	Family	Beta-galactosidase 1-like	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR031330 all species →	Domain	Glycoside hydrolase 35, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23421 all species →	BETA-GALACTOSIDASE RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004553 all species →	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0004565 all species →	Molecular Function	beta-galactosidase activity	Interproscan
GO:0005773 all species →	Cellular Component	vacuole	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQPTP00000069034.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.