Gene detail

Detailed information of ENSQPTP00000069359.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031572903.1, titin-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

CDS

ENSQPTT00000081294

ATGATGAGTGTTGGTCAagtgcctatcatttcttattACATTCTTGGTTTCATCGTGGGATTGTATTTACTTCCTCACGTAGACACAACAGCTCGCTTCACTCAGTTCCCTCCCAGTGTGTTGTACGTATCTAGTGGAGGAACAGCCAGGTTTGTGTGGGACTACCATGTGGACAACAGATTGAACGAGTTTAAAAGTGAATCACCAATATGGTACTTCATAGATCATGGAAATACTGATAGGAAAATCGGTCATGATGACTTGTACAAAAGCTGGAGTTTTGTCATCAGCCGAGGAACATGTCCATCAAGATTACTGAACCCTGATCGAGTAAGCAGAGAGTCCAATGCTACTCTGGTCATTACTAGTGTGACTACTGCTGATAACGGGATATATCAATGTGTGCTGAACCTTGTTTTAGGCGGACCGAAAAAACGCCAAGCAGAACTTGTAGTTACAGTACGACCTGCATTCTTACCAAGTCGCCCAAGCAACACATACCAGATTATCGAGGGAGATAATCTAAAGATAAACTGCACAGCTATTGGTCCACCAACACCGAACATCACGTGGGTGAATGTCACAGATGATAGTATTGTTACCATGAGCCAAGGATCAGGAAGTGCTGTACTGCAGATAGACAACATTAAACGATACCATGCTGGGGTATATgagtgccaggccaagaacaATCCAAACGAAGATGCAACCACTTCAAGGACAAGTGTAACAGTCTACTACAAGCCGACGATTTCAAAAGAGCTTTCTAGCAGTGATAGTACTTCTTGGAATGGCAGACAGGTGACCCTCAAGTGTGTTGTCAGCGATGGATTACCCGCACCAGATATCACGTGGTACAAGCCCAGTGATCAACAAATAACAACAGGTGTCACAGCTATTGCTAAAGGAAGTCAAGTGGTAATAACAACGATAGATGGTGCAGACTATGGATCGTATAAATGTAAAACAACAAACGTCGCTGGCAGTGTTGAGCATGTTATCATTGTAACTCAGTTGTTCCCACCAGGTGTCCCTAATGCCACGATACTAGACCAGGATATCCAAGCATCATCAGTGACTGTAAGGTGGACCAAACCAGGCTATGATGGTGGAAGTCCTGTTATTGATTACAAAGTACAAATCAACACAAACCCACCACAAGAAAAGAATGTAACACGAAGCACGGAGCACGAGTTCACTGGTCTGACTAAGAATACAAGGTTTGAAGTCAGGGTATACACAAGGAATGTTGTTGATTATGGAAATGCATCAATCATCAGCTTTACCACAAAGAAAAGAGGTCCACCACCTTTGCCCAGTCTTCATCTTAGCAAGAGTAAAGCTACTATTACATTGTACTGGACAAAAACGGATGAAAATGGCGgcgaaataaaacaatataccATCTACCAGAAACAGGGTGTAGAAAAATCCTGGACACGTATACATGTCGTCCGTGACTTGACCAACTTGACGTATGTTATACACGTTAAGGATCTGGAGCCTGGTCGGACATACTGGTTTATTGTCACGGCAACCAACGAGTTTGGAGAAAGTGAAAAAGGAGATGACAAGGGTAAAGAAGCGTATATTTTGCCAAAACCGGTTACCACAGCAACCCAAGCAACTACTACAGGTATTGGCGGGCAATCGAGGAATAAATCAGACGAACAAGAAAAATGCAGCTCCACTGCACTAGCTGTCTGTGCAGCTTTCCTAGCGGTGTCTTTGGTAGTTATCGTCCTCTTGCTTCTTTACATATGGAGGAACATTAAAAGGACAGAGCAAACCGGAAATACCAATACAAAAAGAGTCACCAGGAACAAAGCAGTTGAAGATCCAGTTTATGACaaCACCCTAGAAATGGAAGAAAACAAAGCTTCACACATTTCGGTATCACAAAATCTTCAACAGACCTCCCCACCTGCAGAATACGAGCCAATAAGAATTAATCGTGATAATCATCCAATCGAAATATCCAGAGTAGATGGCTACAGCAGCCCCTCCACAGAAACACTCAGTCATTATCAAGCACTCACGCATTCTGATGAAGCTGGTTCATCGCATCAAGGTCAAGGTCCAACTCACGAATCCCTTCACCGTCCACAGTTTAAACTACCTGATGCTCAGCTTGCCAAGAACGTACCAGATACTACATACCATCCACTTGGTGTCAGGCAAAACCCTACAGATTACCAAGACCTCAAGATCTATAATAATATGCATCAGCTAGAAAACAACAGGAATGACCAGTCCATTATATAG

Transcript

ENSQPTT00000081294

CATATTTTTAAAGTGTCAGTTTTCTGAATGTCAAATTCTTCCTCATGATGAGTGTTGGTCAagtgcctatcatttcttattACATTCTTGGTTTCATCGTGGGATTGTATTTACTTCCTCACGTAGACACAACAGCTCGCTTCACTCAGTTCCCTCCCAGTGTGTTGTACGTATCTAGTGGAGGAACAGCCAGGTTTGTGTGGGACTACCATGTGGACAACAGATTGAACGAGTTTAAAAGTGAATCACCAATATGGTACTTCATAGATCATGGAAATACTGATAGGAAAATCGGTCATGATGACTTGTACAAAAGCTGGAGTTTTGTCATCAGCCGAGGAACATGTCCATCAAGATTACTGAACCCTGATCGAGTAAGCAGAGAGTCCAATGCTACTCTGGTCATTACTAGTGTGACTACTGCTGATAACGGGATATATCAATGTGTGCTGAACCTTGTTTTAGGCGGACCGAAAAAACGCCAAGCAGAACTTGTAGTTACAGTACGACCTGCATTCTTACCAAGTCGCCCAAGCAACACATACCAGATTATCGAGGGAGATAATCTAAAGATAAACTGCACAGCTATTGGTCCACCAACACCGAACATCACGTGGGTGAATGTCACAGATGATAGTATTGTTACCATGAGCCAAGGATCAGGAAGTGCTGTACTGCAGATAGACAACATTAAACGATACCATGCTGGGGTATATgagtgccaggccaagaacaATCCAAACGAAGATGCAACCACTTCAAGGACAAGTGTAACAGTCTACTACAAGCCGACGATTTCAAAAGAGCTTTCTAGCAGTGATAGTACTTCTTGGAATGGCAGACAGGTGACCCTCAAGTGTGTTGTCAGCGATGGATTACCCGCACCAGATATCACGTGGTACAAGCCCAGTGATCAACAAATAACAACAGGTGTCACAGCTATTGCTAAAGGAAGTCAAGTGGTAATAACAACGATAGATGGTGCAGACTATGGATCGTATAAATGTAAAACAACAAACGTCGCTGGCAGTGTTGAGCATGTTATCATTGTAACTCAGTTGTTCCCACCAGGTGTCCCTAATGCCACGATACTAGACCAGGATATCCAAGCATCATCAGTGACTGTAAGGTGGACCAAACCAGGCTATGATGGTGGAAGTCCTGTTATTGATTACAAAGTACAAATCAACACAAACCCACCACAAGAAAAGAATGTAACACGAAGCACGGAGCACGAGTTCACTGGTCTGACTAAGAATACAAGGTTTGAAGTCAGGGTATACACAAGGAATGTTGTTGATTATGGAAATGCATCAATCATCAGCTTTACCACAAAGAAAAGAGGTCCACCACCTTTGCCCAGTCTTCATCTTAGCAAGAGTAAAGCTACTATTACATTGTACTGGACAAAAACGGATGAAAATGGCGgcgaaataaaacaatataccATCTACCAGAAACAGGGTGTAGAAAAATCCTGGACACGTATACATGTCGTCCGTGACTTGACCAACTTGACGTATGTTATACACGTTAAGGATCTGGAGCCTGGTCGGACATACTGGTTTATTGTCACGGCAACCAACGAGTTTGGAGAAAGTGAAAAAGGAGATGACAAGGGTAAAGAAGCGTATATTTTGCCAAAACCGGTTACCACAGCAACCCAAGCAACTACTACAGGTATTGGCGGGCAATCGAGGAATAAATCAGACGAACAAGAAAAATGCAGCTCCACTGCACTAGCTGTCTGTGCAGCTTTCCTAGCGGTGTCTTTGGTAGTTATCGTCCTCTTGCTTCTTTACATATGGAGGAACATTAAAAGGACAGAGCAAACCGGAAATACCAATACAAAAAGAGTCACCAGGAACAAAGCAGTTGAAGATCCAGTTTATGACaaCACCCTAGAAATGGAAGAAAACAAAGCTTCACACATTTCGGTATCACAAAATCTTCAACAGACCTCCCCACCTGCAGAATACGAGCCAATAAGAATTAATCGTGATAATCATCCAATCGAAATATCCAGAGTAGATGGCTACAGCAGCCCCTCCACAGAAACACTCAGTCATTATCAAGCACTCACGCATTCTGATGAAGCTGGTTCATCGCATCAAGGTCAAGGTCCAACTCACGAATCCCTTCACCGTCCACAGTTTAAACTACCTGATGCTCAGCTTGCCAAGAACGTACCAGATACTACATACCATCCACTTGGTGTCAGGCAAAACCCTACAGATTACCAAGACCTCAAGATCTATAATAATATGCATCAGCTAGAAAACAACAGGAATGACCAGTCCATTATATAGACATACTACTGTATTGCAGTATTGAAGCATTAATTATAATACATAAGCACCTAATCGAACTTTTACTTCCTCCACCGGCCCCGACAGCCCCCTTTTTTCAATTCCCCTGTATCATTATATGATGAGACATGTGTCTTTCAATAAAGCTcaataaagaatattaatgAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
G5EF96	Netrin receptor unc-40 OS=Caenorhabditis elegans OX=6239 GN=unc-40 PE=1 SV=1
Q28106	Contactin-1 OS=Bos taurus OX=9913 GN=CNTN1 PE=2 SV=1
Q12860	Contactin-1 OS=Homo sapiens OX=9606 GN=CNTN1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000023 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR050964 all species →	Family	Striated Muscle Structural and Regulatory Protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13817 all species →	TITIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06766	NEO1; neogenin	-	Axon guidance	ko04360	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.