Gene detail

Detailed information of ENSQPTP00000075672.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031565285.1, polycomb group protein Pc-like [Actinia tenebrosa]
Species Actinia mediterranea · all data for this species · gene families

Sequence

No sequence record for ENSQPTP00000075672.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P60889	Chromobox protein homolog 7 OS=Rattus norvegicus OX=10116 GN=Cbx7 PE=2 SV=1
Q8VDS3	Chromobox protein homolog 7 OS=Mus musculus OX=10090 GN=Cbx7 PE=1 SV=1
O95931	Chromobox protein homolog 7 OS=Homo sapiens OX=9606 GN=CBX7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004139 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00385 all species →	Chromo	Chromo (CHRromatin Organisation MOdifier) domain	Domain	Interproscan
PF17218 all species →	CBX7_C	CBX family C-terminal motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016197 all species →	Homologous_superfamily	Chromo-like domain superfamily	Interproscan
IPR000953 all species →	Domain	Chromo/chromo shadow domain	Interproscan
IPR043531 all species →	Family	E3 SUMO-protein ligase CBX4	Interproscan
IPR023779 all species →	Conserved_site	Chromo domain, conserved site	Interproscan
IPR023780 all species →	Domain	Chromo domain	Interproscan
IPR033773 all species →	Conserved_site	CBX family C-terminal motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46727 all species →	E3 SUMO-PROTEIN LIGASE CBX4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0016925 all species →	Biological Process	protein sumoylation	Interproscan
GO:0032183 all species →	Molecular Function	SUMO binding	Interproscan
GO:0035102 all species →	Cellular Component	PRC1 complex	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0061665 all species →	Molecular Function	SUMO ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11454	CBX7; chromobox protein 7	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.