Gene detail

Detailed information of ENSQPTP00000078841.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031552981.1, mRNA turnover protein 4 homolog [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

No sequence record for ENSQPTP00000078841.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UKD2	mRNA turnover protein 4 homolog OS=Homo sapiens OX=9606 GN=MRTO4 PE=1 SV=2
A4FV84	mRNA turnover protein 4 homolog OS=Bos taurus OX=9913 GN=MRTO4 PE=2 SV=1
Q9D0I8	mRNA turnover protein 4 homolog OS=Mus musculus OX=10090 GN=Mrto4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007552 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17777 all species →	RL10P_insert	Insertion domain in 60S ribosomal protein L10P	Domain	Interproscan
PF00466 all species →	Ribosomal_L10	Ribosomal protein L10	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040637 all species →	Domain	Large ribosomal subunit protein uL10-like, insertion domain	Interproscan
IPR051742 all species →	Family	Ribosomal Assembly Factor uL10	Interproscan
IPR033867 all species →	Family	Ribosome assembly factor Mrt4	Interproscan
IPR043141 all species →	Homologous_superfamily	Large ribosomal subunit protein uL10-like domain superfamily	Interproscan
IPR001790 all species →	Family	Large ribosomal subunit protein uL10	Interproscan
IPR043164 all species →	Homologous_superfamily	Large ribosomal subunit protein uL10-like, insertion domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45841 all species →	MRNA TURNOVER PROTEIN 4 MRTO4	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000956 all species →	Biological Process	nuclear-transcribed mRNA catabolic process	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan
GO:0030687 all species →	Cellular Component	preribosome, large subunit precursor	Interproscan
GO:0042273 all species →	Biological Process	ribosomal large subunit biogenesis	Interproscan
GO:0000027 all species →	Biological Process	ribosomal large subunit assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14815	MRT4; mRNA turnover protein 4	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.