Gene detail

Detailed information of ENSQPTP00000079248.1 in Actinia mediterranea

Genomic Location: not available for this species
NR annotation: XP_031559695.1, elongation factor-like GTPase 1 isoform X1 [Actinia tenebrosa]
Species abbreviation AMEDI · all data for this species · gene families

Sequence

No sequence record for ENSQPTP00000079248.1 in AMEDI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7Z2Z2	Elongation factor-like GTPase 1 OS=Homo sapiens OX=9606 GN=EFL1 PE=1 SV=2
Q8C0D5	Elongation factor-like GTPase 1 OS=Mus musculus OX=10090 GN=Efl1 PE=1 SV=1
O74945	Ribosome assembly protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ria1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003536 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00679 all species →	EFG_C	Elongation factor G C-terminus	Domain	Interproscan
PF14492 all species →	EFG_III	Elongation Factor G, domain III	Domain	Interproscan
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR035647 all species →	Homologous_superfamily	EF-G domain III/V-like	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR000640 all species →	Domain	Elongation factor EFG, domain V-like	Interproscan
IPR041095 all species →	Domain	Elongation Factor G, domain II	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42908 all species →	TRANSLATION ELONGATION FACTOR-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0042256 all species →	Biological Process	cytosolic ribosome assembly	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:1990904 all species →	Cellular Component	ribonucleoprotein complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14536	RIA1; ribosome assembly protein 1	EC:3.6.5.-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.