Gene detail

Detailed information of ENSSJYP00000001165.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_048588299.1, E3 ubiquitin-protein ligase HECTD3-like isoform X4 [Nematostella vectensis]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000001214

ATGAGTCACAACAAAGCAAGACGAAAGCTTGCCCGCATCCGATGTATTTTGGAAACCGTCAAAGCTCTAAAAAGTGTCGACCCGTTGCCTTCCGCTCTGTGCTATGTTCCACTCGAAATTGAATACAAAAGTTCAAATGAACTGTCGTCCGAACTTAAGAACAAACCGATTATTGTTCGACATCAGCCATCTTTGGTTGCAAAAACTTTCGGGAAGGTTTCTcattccaatgatttaaagCTTTTTGCAACTGGAGAGGAATTTTCCAATAGTGATGGAGATTGGCTCCATTTGACCGAGAAATCCATGAAACAGCTTGCGGACAGCAAAGTTTTGCCAGACGCAGAGGGTTATGATGGTTGGATCTTGGTACATACCAGAGAAAACAAAAGTGACAACCTGCCAATTTTGGAACCAGTTTATGAATCAGAGGGGGCAGTTGTGACAACACCCACACCATCAGCTGAGGATATATTTGGGGGATCAGCATCAAGGGCAGCATTgggaaaatcaaaaaaaggaaTGTTTTATAGATGGCTTGATGTTGTTGAAGACCAATATGTATTGCACATAATTCCACCAAAACTTCCGTTAAACATTAACCAAATGGCAACAAAGAAACTCCAGACCTCACCACCAAACTGGTCCTTTGAATGCGATGAAGAACTTGTGAAATTTCTTAGTGATAATGCAATCGAGACATACCATGGAAATGCAAAGagattcattgaaagaattgaagTGTCAACTGAACAAgaatatgcaaaaaatttgattgatgatgatccaAACACTTACTGGGAATCAGACGGGAACCATGGTCGtcactttatcaaaatttttatgaaaccTGGTGTTGTAATTCAACAACTTTTCATTGGTGTTGATCCCAATGATGATAACTATATGCCATATAAAGTTGTTGTTAGTGGGATGACAGACAATGGCTCAATGACTGTGCTTAAAGAATCTTACATTGAAACTACAATGGCTTGCGATGTATCAATATTAGAGAATGCTCCAGAGTTTTATAAAATGGTTGAAATTAAGATCAAAGAATGTAGAGATGAAGGAATCGACTGTCGAGTTCATTCAGTCAAAGTTGTTTCGAGTAAACAGAGACAAAACGGACTAAGTCGTGATTTATTTGACAAGAACTTAGTACGGTATCCCAAGCTTGACAGTGTGGACAGAGATCTTTTGTATACCAGAGCAAAGTGCCTGTTAAGATTCGCAACTCTTTTGGATAGCAttattcatttcctttttcccACATGGGAATACACAGCCGGTACATTTCAGTGTCTAGAGTGTATTAGACAATTGATGCCATTGTCAAAGAAACGAACAGGCCTAATTGAAAACTGTTTGAGAGAGACACAATCAAGtGGTCTTCCAAACATCCCAAAAATATTTGTGAATCGACATGTGGCTGCTGAGCACCTTGTGAACCCGTCACAAGATCCAGATGCAAAGCATGCTGTTTTTAATCagTTATATGAAGCATTAAAACCTGAAAGATGTGGATCTGAGCTAGATTTCAGATGGGGTCAGAAATACGACCAATGGTGGGAATGCAAATTCATTGGCGAAGGAATTATCGATCAAGGCGGAGGATTCAGAGACAGCCTTGCTGATATGGCGGAGGAGCTTTGCCCAAGTTCAAGTGAGACGCCAATCCCGCTGCCATTTTTCATTCGAAGTCCGAATCAGAGCCAGGATTCTTCGAACGTGAATCGAGATTGTTATGCGCCAAATCCGTCGTGCAAACTCTTTCTCAAATATGAATGGATTGGAAGGATTATGGGTGCTTGTCTACGAGGAAAGGAAAATCTGGTTCTTTCTTTACCATCGTTTGTTTGGAAGCAGTTAGTTGGAGAAAAAGTCACGTGGGCAAGAGATTATGCAACTGTTGATAATTCAGAGGTCAAGCTTCACGATATTCTTGAAGCATTGGATCAAGAAACATACGATGAGAAGTTTGGAGCAGTGCTCAAATTCAGCACGgtCCTCATTGATGGTTCAATTAGGCCACTGAAAAAAGATGGTGTGGAGAAAGCCGTCAGTTATGAAGAACGAATGGAGTATATTAAACTTGTACAAAATgccaaaatgaatgaattcaaAGACCAGATCGAAGCAATTCGGCAAGGACTTCTTAAAACTGTCCCACAAGCCGTTCTCGATTTATTGACATGGCAAGAACTCGAAATCAAAGTTTGTGGTCACCCTGATATCAACGTAGAAGCACTGCAAAAATCAGCTCATTATGAAGATCTGACGGAAACAAATGTGCGAGTGAAATATTTGTGGCAAGCATTGCATAATTTTACAAATGAAGATAGAAGCAGATTTTTGAGATTTGTAACTGGCAGAAGACGTCTGCCAACTCCACTTTTTATTTGTCCAAGTAAATCCCGTTCACCGATGAATTCTTTGCCTGAATCAGCAACGTGCTCGAATACTCTCTTTTTACCATCTTATTCGAGTGCACAGATTGCGGAGGAGAAGCTTCGATACGCAGCGTACAACTGTATCGCAATAGACGCTGATATGAGCCCGTGGGAAGAGtaa

Transcript

ENSSJYT00000001214

CAcaccaaaaagcaaaacataacTGATAAAGATTCAAAGTTGTTTTGGTGTGTCCGCTATCATAGTGCTGATAAAGCATTAACTATGAAATATTGCAGCTGAACTATTTGATTTGTATTTGCTGAAGAGAACTGAATATTGCAAGGATGAGTCACAACAAAGCAAGACGAAAGCTTGCCCGCATCCGATGTATTTTGGAAACCGTCAAAGCTCTAAAAAGTGTCGACCCGTTGCCTTCCGCTCTGTGCTATGTTCCACTCGAAATTGAATACAAAAGTTCAAATGAACTGTCGTCCGAACTTAAGAACAAACCGATTATTGTTCGACATCAGCCATCTTTGGTTGCAAAAACTTTCGGGAAGGTTTCTcattccaatgatttaaagCTTTTTGCAACTGGAGAGGAATTTTCCAATAGTGATGGAGATTGGCTCCATTTGACCGAGAAATCCATGAAACAGCTTGCGGACAGCAAAGTTTTGCCAGACGCAGAGGGTTATGATGGTTGGATCTTGGTACATACCAGAGAAAACAAAAGTGACAACCTGCCAATTTTGGAACCAGTTTATGAATCAGAGGGGGCAGTTGTGACAACACCCACACCATCAGCTGAGGATATATTTGGGGGATCAGCATCAAGGGCAGCATTgggaaaatcaaaaaaaggaaTGTTTTATAGATGGCTTGATGTTGTTGAAGACCAATATGTATTGCACATAATTCCACCAAAACTTCCGTTAAACATTAACCAAATGGCAACAAAGAAACTCCAGACCTCACCACCAAACTGGTCCTTTGAATGCGATGAAGAACTTGTGAAATTTCTTAGTGATAATGCAATCGAGACATACCATGGAAATGCAAAGagattcattgaaagaattgaagTGTCAACTGAACAAgaatatgcaaaaaatttgattgatgatgatccaAACACTTACTGGGAATCAGACGGGAACCATGGTCGtcactttatcaaaatttttatgaaaccTGGTGTTGTAATTCAACAACTTTTCATTGGTGTTGATCCCAATGATGATAACTATATGCCATATAAAGTTGTTGTTAGTGGGATGACAGACAATGGCTCAATGACTGTGCTTAAAGAATCTTACATTGAAACTACAATGGCTTGCGATGTATCAATATTAGAGAATGCTCCAGAGTTTTATAAAATGGTTGAAATTAAGATCAAAGAATGTAGAGATGAAGGAATCGACTGTCGAGTTCATTCAGTCAAAGTTGTTTCGAGTAAACAGAGACAAAACGGACTAAGTCGTGATTTATTTGACAAGAACTTAGTACGGTATCCCAAGCTTGACAGTGTGGACAGAGATCTTTTGTATACCAGAGCAAAGTGCCTGTTAAGATTCGCAACTCTTTTGGATAGCAttattcatttcctttttcccACATGGGAATACACAGCCGGTACATTTCAGTGTCTAGAGTGTATTAGACAATTGATGCCATTGTCAAAGAAACGAACAGGCCTAATTGAAAACTGTTTGAGAGAGACACAATCAAGtGGTCTTCCAAACATCCCAAAAATATTTGTGAATCGACATGTGGCTGCTGAGCACCTTGTGAACCCGTCACAAGATCCAGATGCAAAGCATGCTGTTTTTAATCagTTATATGAAGCATTAAAACCTGAAAGATGTGGATCTGAGCTAGATTTCAGATGGGGTCAGAAATACGACCAATGGTGGGAATGCAAATTCATTGGCGAAGGAATTATCGATCAAGGCGGAGGATTCAGAGACAGCCTTGCTGATATGGCGGAGGAGCTTTGCCCAAGTTCAAGTGAGACGCCAATCCCGCTGCCATTTTTCATTCGAAGTCCGAATCAGAGCCAGGATTCTTCGAACGTGAATCGAGATTGTTATGCGCCAAATCCGTCGTGCAAACTCTTTCTCAAATATGAATGGATTGGAAGGATTATGGGTGCTTGTCTACGAGGAAAGGAAAATCTGGTTCTTTCTTTACCATCGTTTGTTTGGAAGCAGTTAGTTGGAGAAAAAGTCACGTGGGCAAGAGATTATGCAACTGTTGATAATTCAGAGGTCAAGCTTCACGATATTCTTGAAGCATTGGATCAAGAAACATACGATGAGAAGTTTGGAGCAGTGCTCAAATTCAGCACGgtCCTCATTGATGGTTCAATTAGGCCACTGAAAAAAGATGGTGTGGAGAAAGCCGTCAGTTATGAAGAACGAATGGAGTATATTAAACTTGTACAAAATgccaaaatgaatgaattcaaAGACCAGATCGAAGCAATTCGGCAAGGACTTCTTAAAACTGTCCCACAAGCCGTTCTCGATTTATTGACATGGCAAGAACTCGAAATCAAAGTTTGTGGTCACCCTGATATCAACGTAGAAGCACTGCAAAAATCAGCTCATTATGAAGATCTGACGGAAACAAATGTGCGAGTGAAATATTTGTGGCAAGCATTGCATAATTTTACAAATGAAGATAGAAGCAGATTTTTGAGATTTGTAACTGGCAGAAGACGTCTGCCAACTCCACTTTTTATTTGTCCAAGTAAATCCCGTTCACCGATGAATTCTTTGCCTGAATCAGCAACGTGCTCGAATACTCTCTTTTTACCATCTTATTCGAGTGCACAGATTGCGGAGGAGAAGCTTCGATACGCAGCGTACAACTGTATCGCAATAGACGCTGATATGAGCCCGTGGGAAGAGtaaagaaagagagagaaagaTTAGTAAAATACGAGAGACTGATTTGATGTTTTCAAGATCATTAGCACATCATCATGATTTTTAATACATCACCTGGTGACAAAACAGTTAAGGTTTAACTGATTATAAACTACGATTTTATGGAGCATGCCTTCGTTAATAGTTCTTGTTATTTAGTAACTtccaatttgttttcaatttacaTTGACTGAGGCATCTCTACTTAACTTCATACTTTCTGCACTTTTCACTtaattcttaatattttcagatCGTCCAAAAAGCAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5T447	E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens OX=9606 GN=HECTD3 PE=1 SV=1
Q3U487	E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus OX=10090 GN=Hectd3 PE=1 SV=2
Q15751	Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001728 (this species only)
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03256 all species →	ANAPC10	Anaphase-promoting complex, subunit 10 (APC10)	Family	Interproscan
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004939 all species →	Domain	APC10/DOC domain	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR042469 all species →	Family	E3 ubiquitin-protein ligase HECTD3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46654 all species →	E3 UBIQUITIN-PROTEIN LIGASE HECTD3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12233	HECTD3; E3 ubiquitin-protein ligase HECTD3	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.