Gene detail

Detailed information of ENSSJYP00000001462.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047134073.1, guanine nucleotide exchange factor VAV2 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000001518

TGATACCAGCAGCATACATGAAAATAACGAAGATATTTATGATCCAGTCACTGTCGAGGAAAGCGAGAAGATTTATGACGATATTGTCAAGTGTTCAAAAGAAAGTCTGGCAATTTTAGCAAGAGAACCTGACAAGCGAACCCATGTTGTTAACGAAATTGTGCAAACGGAGGAGAACTATGTGAATGCATTAAGGGTGATGATTGAGTATTTCATTCGGCCGTTAAAAACGTTCATGACAAAGGATGACAAGAAGATTATATTTATGAATACTGAGTCTTTGTACGAAATCCATTGCAATTTCCTGAGAAGTCTGAAATCGCGCGGATTTCAGCTGAATTTGCAAAGCTTCATCGATTCCGCTAAGAGTTTCTTGGAGTATGCTACCTATTGTTCAAGAATGCAAGATGCCCAGCAACACGTTACAGAACTTTGCAAGGACCAGAAATTCAGCCAAGTTGTGGAGGAATGCCAAAGGAAATCAGGACGGAAGTTTCCGCTTCATGAACAACTGATCGTGCCATTTCAAAGAATCCTGAAATATCCACTTCTTCTCAGGAGTCTTCTCAAAGACACACCACAAGACCATCCCGATCGAGCAAAAACTGAAGAATCTTTAGATTTGATGGAGGATATTGCCAAGTTCATTAACTTGCATAAAAAGGATGATGagatgataaagaaaatatcGAGGATCGAGGCAAGTGTCAAAGACGATCTCTGCCAAAACGATCGTATGCAAGATTATGGTAGATTTATAAATGACGGCGAAATCCAAGTTAAATTTACCAGTGATGAAAGTAAAAGGAATTGGTCAAAACGTTATGCCTTTTTATTCGACAAAGTTTTACTGCTGTGCAAAACTAGAGGGGAAACCTTtgagataaaagaaaaattggatttaaaaagattcaaaGTTGATGGTGAAATACCAAATTCTGGGAAAGGAAAGTCTGTCCATTGTTGGAACGTGCAGGCCCACACTAACGATGGTGTTACGGAGGTAAACAACTGTACAATGGCTGTTACTTCAACACTCCTCAAAGAAGCCTGGGTCGCGAAGCTGCAAATGTGCATaaatgccgTCCAGCTTTCAAGATTAAGCCGTTTAGGACGACACAAATTTGAATTGACAAGTTTCCCAAACACTACATATTGCTCCGTGTGTACCAAATTGTTATGTGGATTGATAAGTCAGGGATATAAATGCGATGtttgTCACTTCAACGTGCATTATGATTGCATAGAAAAATGCCCAGATTGTGTTCAGCGTGCTAGCAGAAAACCAAAGCAAGgCACGAATTCATCCAGGTACGAAGAAAATAATGTTGATATACGCAAAGTAGAACCACCACGTGATCCTGTGCCTACAGATGTGAAAACTATGCTGCGAAATTTCCCAtgGTTTGTGGGAATCATGAATCGACATAAAGCAGCTGAGAAATTACTACAACAAAGAAATGGCACATTTCTTGTCAGAGAAAGTGATAACGAAAAGGGAAAATTTGTGCTCAGCATCGTATTTAACAATGACGTTAAGCACATTAAAATTAACTACAATGGCAGTTTTTACTTCATCGCAGATTTGTTCCAATTTAGATCGATTGGGGAGTTGATTGACTACTACAAGAGAAATTCACTGAAAGAAAGTTTCCCATCTTTACCGACCGTTTTAACGGGCTCCGTGCCTGCGCGGGATGTTGTCGTTGCCAGATATGCCTATAATGCAAGAAATCAACAAGAACTTTCTTTAAGAAGAGATGCTCGAATATCCGTCATCAAAAGAGATGGAAATTGGTGGTATGGAGAACTCGATGGAAATTTCGGCTTCTTTCCAAAGACCTACGTTGAGGAATTATCAACTGCATCGTGATTGCAATCAGAGTATCAAttggttttgaaaaatgtatatttatgAATGGAGTTTAAGGCCAGTTAGTGGTTTAGACTGTAGAAATTAGGATATGACTCGGTGGTAACTTATCCTGCTCCCAAATATTATTGAAAGTAGATGTATAACTTTGAGGTGTACCTCGTTGGAAAAGAAGTGGATGGAAGAGGACTGGAGGGGGGTTTTAGGGGTATCCTAAATTTTTCTTGAGTTTGAATTTTCATGCGCATAATCATGATTCTATGTTCTATTTTGGAATCCTGCTAGATATTCtaaaccctttcacccccatTGATAATACAGATGTAAAGCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9R0C8	Guanine nucleotide exchange factor VAV3 OS=Mus musculus OX=10090 GN=Vav3 PE=1 SV=2
Q9UKW4	Guanine nucleotide exchange factor VAV3 OS=Homo sapiens OX=9606 GN=VAV3 PE=1 SV=1
Q08DN7	Proto-oncogene vav OS=Bos taurus OX=9913 GN=VAV1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002927 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF14604 all species →	SH3_9	Variant SH3 domain	Domain	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF00017 all species →	SH2	SH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980 all species →	Domain	SH2 domain	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR036860 all species →	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45818 all species →	PROTEIN VAV	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0043087 all species →	Biological Process	regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05730	VAV; guanine nucleotide exchange factor VAV	-	Lipid and atherosclerosis	ko05417	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.