Gene detail

Detailed information of ENSSJYP00000001643.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_006899056.1, PREDICTED: target of EGR1 protein 1 [Elephantulus edwardii]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9D2E2	Target of EGR1 protein 1 OS=Mus musculus OX=10090 GN=Toe1 PE=1 SV=1
Q96GM8	Target of EGR1 protein 1 OS=Homo sapiens OX=9606 GN=TOE1 PE=1 SV=1
Q5RAR6	Target of EGR1 protein 1 OS=Pongo abelii OX=9601 GN=TOE1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008338 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04857 all species →	CAF1	CAF1 family ribonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR000571 all species →	Domain	Zinc finger, CCCH-type	Interproscan
IPR051181 all species →	Family	CAF1 family poly(A)-specific ribonucleases	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR006941 all species →	Family	Ribonuclease CAF1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15092 all species →	POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0000175 all species →	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0015030 all species →	Cellular Component	Cajal body	Interproscan
GO:0017069 all species →	Molecular Function	snRNA binding	Interproscan
GO:0034472 all species →	Biological Process	snRNA 3'-end processing	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13202	TOE1; target of EGR1 protein 1	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.