Gene detail

Detailed information of ENSSJYP00000001650.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047136126.1, uncharacterized protein LOC100199607 isoform X3 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000001708

ATGGAAAGGCAGCTATATTTTTCACATCAATTTTATATAAAGTTTCTTTCTATCAAGGTCTCTTTCATAAGAGCTATTGAGGTGAAATactcatttttgataaaagatgGATTTTGGGATAAAAATTCTAATTCATGTTATACAaattttATTCAGATTGAAGTTAGAAACCCGAGGACGCATATAAGCAGAGAAAAGGCTTTGTATACAGACTATGAAATTGTTGTCAAGacAAACAACATTGCTTTTGCTACTAATGAATCATCGGTTCGGAGAAGATATTCAGATTTTCAATGGCTGAGAACAAGGCTGATAAATCAATATCAATTGGTTACttCTCCCCCGGAGCTTCCACCAAAGCGCCTGTTCGGCAGATTTcaaagacaatttttgaaaaggcGACAGGCAGGCCTGCAAAAATTTCTCGAAAGGGTCGTTGAAGATAACCAATACTTGTCAGATGTCGCGATACATCTTTTCCTACAAAGCAGTTTCCCGATCAAAGAGATCGAACGATACCTCGATGGTATTGTTGGCGAGGGTGATCTAGTAGAGTCATTGCAATCCATCGGTGACAGGAAGCAATCTGGCCTCTCTCGTAGTATGGCTGAAATACCTCAGTTCGAGACACCCATAGAGAATGACAGTGGTTGTTACTACAGTACAACTAGTTCAGTAAATGATTTGAGTAAGTCCACGTTAATTGTCTCTGAGTCCATCTTCCAAAATTCTTCTTTATATTTGGCGGCTAACGAGACGGAGGAGCCTACAATAGAGGTCACGGGAGAAGAGCCTGGTCGTCTGTTACAGGTCGATTCTGGACACCTGACTTCAGGCAGCCAGCAATCACTTCATAGACAGACGTTGTCATCTGAAAGTGATTGTGATTACATTGGATCATTTGAGTATGATGCAGATGATGAAAGTGATCTTTGTTTTCTTGAAGGCTCGATTGGCTCTGTTGATCTTGTTTTTCACTCTCAGATTCTTCCGGTAGAAGAGGCGCTTCAGATATTGCTGACAAGACCGAAAATATCCGAACGCATTTTAGCtactgatgatgatactgatgaaGAATTTCACGAATCGGAATATGACGTAATAGATTCTGATAATGAAGAATTTGCATCGAGATCGAGACGCAAGTCGTCGTCGTCAAGCAAGAAGAAGCTGAGTCGCAGTCTTTCAGATGTAAAACTCAGGCGAAGACCATCACGGTCAAGCATGAACAAGGAAAATGAATGTCGGCCTTCCTTCCAATCGATGCCAAATATTCGTGTCCCCATAGCAAAAAAGACAAGGAAGTCTTCAAAGGGATTGCAGTTTAAAGCATTAGCTGTGCATAAGGAAGACCCCGAGAAGATAAAGATCAATATCGAGGGATTTACTACATCTGGAAGTGTAAGCAAGTGTAATAAGTCGGATGAAGCTGATGAAAGCTTCGTACCGAATTCAGAGATGGACTGCTACAGTACTTGGAACAGTCCACCTAAAATGATGAATGGGAACTTAGATTCGAGTGAAATCGAAGCAAGTTCTGAGAATTACCTTGAAATAAAGCCACGTTCTACGCATGCAGCGAGAGATTTGTTCAAAAGAATCGTAAGTAAGCATGAACATAGGTTGTATGACGAACTATCAACGAGAATAAGCGGCCGCTTCCGTGTGAGCGCTATTAAGGAGGAGGAGAATACTAGCAGACGGGGGTCTGCTTCGTCAAATGAGCTGACATTGAGGCAAAGTTTATTTAGAGATATTCAAACCACTAAAGTAAGCTCTGAACCCGTGACGCCAGTAGGAGAGCTGCGATCATTTGACAAACAATTGCCTCCAGAATTATCGGATGTTTCTGGGGCATCTTCAGTTGTTTTCTGCAAGGAACCTCAAACTGATTCTGAGGAATGTGTTCCAAACTATGAGAAGAAAAACACACCAGTAACTGAAAGTGAACCAGCTCAAAAATTTCCAACGTTACTAAGCCtagcagaaaatattttggaaactAGGCAATTGTTATCCGATGAATCATTAACTATCAAAAATGACTGCCAGCTGCCAGCAGAAGATGAAACGCACCTTCCAATAAAGGATGATGATGTCCCGCATGCTTTTAACGATCCTTTGATAATGAACAATACAGATGACGTTGTGGATATTGCAACGAAAGAGGATGATAAACTTGCAATGGATGTGGCTGATCACGAAAAAATCGTTGACGAAAATAGTCTCTTGTTTGTTTCTGACAATATAGACAATATAAGCCAAACTCAAGAAAGTAGTGAGAAGACGTACTTCACGACAACTAGCGAAAAAGATCATCAACATATAGCGCAAGATACTATTAGCCAGACTAAAACAAATTCGGGTAAAACCAGATTGCTCGAGACGGCTGAGGTCTTTTTCGGAGATTGTCGTAGCTCTGAAAAAGTTTTGCATCTACTTGGATTAAACGGAAACTTATATAAAAACGATTCAATGTTCCAGTTTGAAAAAGCAAGAGCTGTTTCGCCCACTCATGCTGTTCTTGGTACCTATGACGTAATTCCGGATGTGGCCACTTGCATCCTTGAAGACTACGATATCCTGAGCGACAAACGAGAATAG

Transcript

ENSSJYT00000001708

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8WG21	Sorting nexin-10B OS=Danio rerio OX=7955 GN=snx10b PE=2 SV=1
Q7SH92	Sorting nexin-3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=snx-3 PE=3 SV=1
Q4I1H6	Sorting nexin-3 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SNX3 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001029 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00787 all species →	PX	PX domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001683 all species →	Domain	Phox homology	Interproscan
IPR036871 all species →	Homologous_superfamily	PX domain superfamily	Interproscan
IPR043544 all species →	Family	Sorting nexin-10/11	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46209 all species →	PX DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:0005768 all species →	Cellular Component	endosome	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0016050 all species →	Biological Process	vesicle organization	Interproscan
GO:1901981 all species →	Molecular Function	phosphatidylinositol phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K06670	SCC1, MCD1, RAD21; cohesin complex subunit SCC1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.