Gene detail

Detailed information of ENSSJYP00000001942.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_048583084.1, uncharacterized protein LOC116603357 isoform X5 [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000002012

ATGACAAGACTCGGTTCAAGGACCACATGGGGCCCGCTGGCAAGAAGTGAAgcagaatttgaagaaattgttGACAATCTAAGCGAATTAGAgGCCACTGAGAAACAAATGCACCAACTTGCTGTTGAACCACCGAAACTTCTGGATAGATACGAAAGAAGAGTTCAGTATTCCAATAAAAATGGCTTAATTGTTGATTTGGAAGCTTTTGAAAGAGAGCGAAAGTTTAAGAATATCTGGTGCGAGGAAGAAAAggcaattttcaaagaaagGTTCATGCTGTAcccaaaagattttgaaaagattgcCGAGGGTCTTAAAAGAAAGACGGTCTCTGAGTGTGTTCTCTACTACTATcgcaataaaaagaaagagaatttCAAGGCAACTTCGAAGAAACCAAGCAGAAAAACTGGAAGGCTACAACGACAActTGTCAGCACGCTAACCTATGCTCAACCGCTGCCGAACATACAGGACCTCCAACAACCACAGCCTGTCAAAACAAGACAAAAGGAGAGAGAACGGGAGAGGGAAAAGCAAAAGGAACAAGACCAGCAGAAAGACCAAGCTGTGGAGAGGCTGAAATCATTGCGATCGGAGCAAGAGAATCCGGATAAAAATGAAGGAAGGCGGACAAGGGAGTTGAGATCTTCAGACGAGAAGTCAACAGAACAAGCTGAACCTTGTGTCGCTAATGATGTGGCTGGTAATAAGTTAGTCACTCATCAAATGGAAGCTCAATGTAAACAAACAGTTGATGATCTAATCGCAAGGTACCTTGCTAGAAAGCCTCTTCCAGCTGAAAATGTTGATCCATCTCGTTGGTCTGATATCGAAATCTCAAAAGCTATTGAAGGTTTGAAATGCCATGGCAGAAACTGGCCCGCCATTTCAAGAATGGTAAATACAAAGTCAGAAGCACAAtgtaaaaatttctatttcaattaCAAGAGGAAGTTTCATCTGGAATCAATTCTTGGAATTTCGAAACATcCTATTACGTCATTTCAACGCGAAGGAACTGGCAGTtctaatgaagatgatgtgATCAGTAAAAAGAGGCGAGCAAAGAAGACAGCACAGCAGGAACGTGATTCGAACGAGGTTGATGCTCAAGTTGGCGAGCAATATTCACAAGATAAGCCGGTCGATGTAGAAGAGATTGAAATCGACCAGTCAACGCAAGAAGAGAGTACAATGGATGTACAAGAAAGTGAGAGCGCAATGCAAGAAGATAAGGAAATAGATGCCTCTGAGCAAACCATGGAACAGACAGTGGTAGTTGTTACTCCGGAATCGAATGTTGAACGAGCTGAAACAAGAGAACAAGCAAGGAAGATTGTCATAAAGAAAGATACAGATGGTAAAGAAAACAGGCTTTCTGAAGAAGTTTCTGTCCTTAGTCATACAAGTAGATCCGATGCAAAGAGACTAGACATTAGTAGGCTGAAAGATGAGGATGTGGATGCAGAGAGCTGTAAAGAGACCATAGCTCCTAATGATAACATTGTGCCTGCCTCTTTACAAGTATCTTCAGTTGAATCATCGGTGGCATTCAGACCCGACTCACTAAGAATCAGCGATGTCATTGCTCAAACCAAAGCCAAAGAAGTCGATCCAATGGCCTCAGTTCGCACCAAGCCTCCTCCTCTTACCCCTGTATTAGCAAACAAAGCAGTCGGCCAGTCCTCAGATGCCGATAAGGCAGGAAGCCCTAGCTCTGTCTTAAAAGGCATTTCACTCCAAGGCGAGATCGGAGCTTTCAGGGAAACGCTAGAGAGAACTCTGGAGAagaaaaatgaactgaacaAAAACCCTGCTGCTGCTAGCTACAGAGAAGGGGCCggagaaaatcaaaaacagtTCCCTGCATCGACATCTTATCCTCAGCAACAGGGAGAGAGGTTAGCTGCTCAGCTGCCTTCGCAACGCATACCACAGACATTTCATGATGCTCACAAGCATGTAGAACCTTATTCATTTAAACAATCATCTTTGCATCCCTCTTTAGAACAGTCAGCTGCAATTCAGGCTTTTGCTGTTAGGCAGCCATCTTTAATGTCAGTTCAGCAATCTCAAGCTAAGCAGTTTGGTCATCTTTCTCAAGAAGCTGTAGCGATTCAGAAGCATTACCAGCATCCACACATGACTCAAGCCAGAGGGAGTTCGCAGGGTAAAAAATCTCCTTCAGCTGTAGGACATGTAATCCACACCCACAGATCATCACCAAAGACATCAACGTCTGTTGCTGTGGACTCCCGCGGAAATCATCAGTTTGTTTCGTCAagaccaagccatttcatGTTTCCCGCGGCAACATCTCAATACACGGGTAATCAAAGCTCTGAGCAAGTAAGGCATTCGAGTGAACTGAAATATCCAAGCATCACCGATTATTCCAGCATGTCTCATCAAGGAATGCTCTTCACAAATGCGGCTAACCCCAATGAATTGTTTCTACGACATAGCGAGCATTATGAAGGCTATCGTCATCCATTAGTCAGTCAATCGGGTGAGAGGGCATATCCGTACATGGAGGCTAATTTCTCTATGTCTGCTAGTGATGCAAGAACTAGAACCTACGGCGAATTGCTTGAGCGCTCTGCTTCTATTCCAAGCCTAAGGCATTCATCAGCAGATGCACCTAGGCCTAATAAGAGCCTTTCAAAGGACAATATCTCACATATCGGACAGCAAGCGAGAGATAAAGGCATATTTCCGATTGACCCCCGTCAGCCGCACATGTATTACGAAACAGCGATGGGTACAAGGGAAAGAATTGATACTAGGTCGTTAAACAGACGGGAGCAGATTATGACAGAGCAAATGCACAACCAAAACCTTTCTCTTGAGCATCAAAGGCATATAAGAGAAGAGAATGTAAGGGGAAGCAATCACGGGACTGATAGTCCGAAACACCAAAGTGGTTTGTCAACTAACACTCCATCAGCTGCAGCAATGGACCATCGAATACCGCACTATCTTCCAAGCAATCTTCACAGTCACATTCCACAGTTTATGAGAGAGAGAGAATCAAGGCCGACCCTCGATCAGCAGTTGTTACAAAGCATTGACGGAAGGAAGGCGCCCGGAAGCATTTATCACCACCCAAGCGGGCTCCATCCAGATTCTAAAGTTACACCTAGAGTAGCGGAACTGCCTCCGAACTTAGATGATTATAGGAAGCAGCAGATTATAtttgagcccattcaccgcgGTGACCATAGAGCTCTTGCCGAGTTGCAACATATGCAAGGAATGAGAGAGGCGAAGAACAGATACGAAAAAAGGCCATCAAGTGTAGGCGTTGCTAGTGCTCAATCCAGTGACCCCCGGCAAAAGGTTCCATCCGAAAGCACCACTCCACCAGAGCGTCATTATGGAATATCGACTGGGCTGGCTGCAAGAGCACCGGCACACATGTCAATAACTGGAGCGAGAGAGTCTCATGATGATATCAGACTTTTCGGCAAATCACTGCCCCTGACACGCGAAGGCTCCCCGATAACTATAATGAAACACGAAGAGCTAGAGTATCTAAGAGAGAGAGGTATTATTCCAACCAAGCGTACATCTGCTATTAAGAACCAATCGAAGAATACAAGACCATCCTCTGTTGACTCAGTGATTCACAGATCATTTTTAACTGAAAGACAACAACAACTTTCGTCATCGTTAGGTGATTTGCGTAACCTTTCCGAATTGCATCTGAGCCCTAGCTTGCCCATTTCACCTGTTTCTGCATCTCATACTTCCAAGAAAACATTCATGTTTCGCCCATGGGAACGAGCAGAAACAGAGGAAGATACTTTGTCTTGGAAAGATGCACCGAGCCCCCCTGCAGCAACGCAATCATTACCAAAAGATAAAGTTGGTTTGCTTAAAGTTGGACTGTTAGAGACAGGGGCTGATGAAAGGCGATCATCAACAGGCGTTGATAGCACGTATGATGAGCCATTAATGTCACCAACGATTCCGTACACAGATCGAGCTAGGGATACTCCAGTTAAGGATATAACCTCTTCCACTGGCAACAGTCCTTCGTTTTTTGCTGCAGAGTCGACCCTAGGCAGCATTACCCCAACGACAGAAGAGGGCAAAGTCTATTATGCTCCGCCCGTGGAACCATTGAAAAGAACACCTAACTCTAATTTAGATGAGCGACCTCAAAGTCCTGTTGATTCTGAAGCAACGTTGTCTGCAGATGAGGCTGAAATGGAGATGATGAGAGAGACCCTACATGAACGAGAAAGAAGCGCTAATTTGGATGATAGTTACAGAGACAGAGAGACCGCTGAAGCGGGACTATCTCCTGTTACTAATATTGGTGAATTAGGCTCATTTGCAGCACCCGAAAAGGTTGTTGACTTAGAGTTCACGGTTAATAAGATCGCATTAGTTAAAGACAGTCACggaggttttgagaaaattcaaattgaaagGCATCATGAACAACATGATCTATCAGCTGATTTAGAAGTGTCAAAAATAACAGATCAACAAGAGCAGATAGTAAAAGGCAAGAGGAAACAGAAATCCGGTCCaagaggaaagaaaaagagCCCAAAAAGAATTGATCAAGGAAATGTTGATGAATCTATGTCGGGAGTTAAAGCAGACAAATCTCATATTACATCTACTCTTTTAAGTGAACTTGGAACTGACTCCTCGGGAGTTATACCATCTTTTTTGCCTAGAAGTGAAGCTGTATCGGAGCAAGCTATATCGTTGCCAGAAACTAATCGTGAGCCAGAAACCGCCAGAACTTCCGGAGATAAAAACGAACCAGTGCAGATTCCGCCCCCTGTTCTAAATGTCTCTCCGGTTAGCCTCTTTGATGACGTCACTTCTTCAGCAGCAAGTGGAGAAAAAGAGACGACTTCCGTTGCAGAACCGGAAGAGGACGACATGAAAGCAAGCAGACCGGAAGGCGAGGAGAAAATTTCAAACGAGAGTGATGGC

Transcript

ENSSJYT00000002012

CAGCAAGAACGTATGACAAGACTCGGTTCAAGGACCACATGGGGCCCGCTGGCAAGAAGTGAAgcagaatttgaagaaattgttGACAATCTAAGCGAATTAGAgGCCACTGAGAAACAAATGCACCAACTTGCTGTTGAACCACCGAAACTTCTGGATAGATACGAAAGAAGAGTTCAGTATTCCAATAAAAATGGCTTAATTGTTGATTTGGAAGCTTTTGAAAGAGAGCGAAAGTTTAAGAATATCTGGTGCGAGGAAGAAAAggcaattttcaaagaaagGTTCATGCTGTAcccaaaagattttgaaaagattgcCGAGGGTCTTAAAAGAAAGACGGTCTCTGAGTGTGTTCTCTACTACTATcgcaataaaaagaaagagaatttCAAGGCAACTTCGAAGAAACCAAGCAGAAAAACTGGAAGGCTACAACGACAActTGTCAGCACGCTAACCTATGCTCAACCGCTGCCGAACATACAGGACCTCCAACAACCACAGCCTGTCAAAACAAGACAAAAGGAGAGAGAACGGGAGAGGGAAAAGCAAAAGGAACAAGACCAGCAGAAAGACCAAGCTGTGGAGAGGCTGAAATCATTGCGATCGGAGCAAGAGAATCCGGATAAAAATGAAGGAAGGCGGACAAGGGAGTTGAGATCTTCAGACGAGAAGTCAACAGAACAAGCTGAACCTTGTGTCGCTAATGATGTGGCTGGTAATAAGTTAGTCACTCATCAAATGGAAGCTCAATGTAAACAAACAGTTGATGATCTAATCGCAAGGTACCTTGCTAGAAAGCCTCTTCCAGCTGAAAATGTTGATCCATCTCGTTGGTCTGATATCGAAATCTCAAAAGCTATTGAAGGTTTGAAATGCCATGGCAGAAACTGGCCCGCCATTTCAAGAATGGTAAATACAAAGTCAGAAGCACAAtgtaaaaatttctatttcaattaCAAGAGGAAGTTTCATCTGGAATCAATTCTTGGAATTTCGAAACATcCTATTACGTCATTTCAACGCGAAGGAACTGGCAGTtctaatgaagatgatgtgATCAGTAAAAAGAGGCGAGCAAAGAAGACAGCACAGCAGGAACGTGATTCGAACGAGGTTGATGCTCAAGTTGGCGAGCAATATTCACAAGATAAGCCGGTCGATGTAGAAGAGATTGAAATCGACCAGTCAACGCAAGAAGAGAGTACAATGGATGTACAAGAAAGTGAGAGCGCAATGCAAGAAGATAAGGAAATAGATGCCTCTGAGCAAACCATGGAACAGACAGTGGTAGTTGTTACTCCGGAATCGAATGTTGAACGAGCTGAAACAAGAGAACAAGCAAGGAAGATTGTCATAAAGAAAGATACAGATGGTAAAGAAAACAGGCTTTCTGAAGAAGTTTCTGTCCTTAGTCATACAAGTAGATCCGATGCAAAGAGACTAGACATTAGTAGGCTGAAAGATGAGGATGTGGATGCAGAGAGCTGTAAAGAGACCATAGCTCCTAATGATAACATTGTGCCTGCCTCTTTACAAGTATCTTCAGTTGAATCATCGGTGGCATTCAGACCCGACTCACTAAGAATCAGCGATGTCATTGCTCAAACCAAAGCCAAAGAAGTCGATCCAATGGCCTCAGTTCGCACCAAGCCTCCTCCTCTTACCCCTGTATTAGCAAACAAAGCAGTCGGCCAGTCCTCAGATGCCGATAAGGCAGGAAGCCCTAGCTCTGTCTTAAAAGGCATTTCACTCCAAGGCGAGATCGGAGCTTTCAGGGAAACGCTAGAGAGAACTCTGGAGAagaaaaatgaactgaacaAAAACCCTGCTGCTGCTAGCTACAGAGAAGGGGCCggagaaaatcaaaaacagtTCCCTGCATCGACATCTTATCCTCAGCAACAGGGAGAGAGGTTAGCTGCTCAGCTGCCTTCGCAACGCATACCACAGACATTTCATGATGCTCACAAGCATGTAGAACCTTATTCATTTAAACAATCATCTTTGCATCCCTCTTTAGAACAGTCAGCTGCAATTCAGGCTTTTGCTGTTAGGCAGCCATCTTTAATGTCAGTTCAGCAATCTCAAGCTAAGCAGTTTGGTCATCTTTCTCAAGAAGCTGTAGCGATTCAGAAGCATTACCAGCATCCACACATGACTCAAGCCAGAGGGAGTTCGCAGGGTAAAAAATCTCCTTCAGCTGTAGGACATGTAATCCACACCCACAGATCATCACCAAAGACATCAACGTCTGTTGCTGTGGACTCCCGCGGAAATCATCAGTTTGTTTCGTCAagaccaagccatttcatGTTTCCCGCGGCAACATCTCAATACACGGGTAATCAAAGCTCTGAGCAAGTAAGGCATTCGAGTGAACTGAAATATCCAAGCATCACCGATTATTCCAGCATGTCTCATCAAGGAATGCTCTTCACAAATGCGGCTAACCCCAATGAATTGTTTCTACGACATAGCGAGCATTATGAAGGCTATCGTCATCCATTAGTCAGTCAATCGGGTGAGAGGGCATATCCGTACATGGAGGCTAATTTCTCTATGTCTGCTAGTGATGCAAGAACTAGAACCTACGGCGAATTGCTTGAGCGCTCTGCTTCTATTCCAAGCCTAAGGCATTCATCAGCAGATGCACCTAGGCCTAATAAGAGCCTTTCAAAGGACAATATCTCACATATCGGACAGCAAGCGAGAGATAAAGGCATATTTCCGATTGACCCCCGTCAGCCGCACATGTATTACGAAACAGCGATGGGTACAAGGGAAAGAATTGATACTAGGTCGTTAAACAGACGGGAGCAGATTATGACAGAGCAAATGCACAACCAAAACCTTTCTCTTGAGCATCAAAGGCATATAAGAGAAGAGAATGTAAGGGGAAGCAATCACGGGACTGATAGTCCGAAACACCAAAGTGGTTTGTCAACTAACACTCCATCAGCTGCAGCAATGGACCATCGAATACCGCACTATCTTCCAAGCAATCTTCACAGTCACATTCCACAGTTTATGAGAGAGAGAGAATCAAGGCCGACCCTCGATCAGCAGTTGTTACAAAGCATTGACGGAAGGAAGGCGCCCGGAAGCATTTATCACCACCCAAGCGGGCTCCATCCAGATTCTAAAGTTACACCTAGAGTAGCGGAACTGCCTCCGAACTTAGATGATTATAGGAAGCAGCAGATTATAtttgagcccattcaccgcgGTGACCATAGAGCTCTTGCCGAGTTGCAACATATGCAAGGAATGAGAGAGGCGAAGAACAGATACGAAAAAAGGCCATCAAGTGTAGGCGTTGCTAGTGCTCAATCCAGTGACCCCCGGCAAAAGGTTCCATCCGAAAGCACCACTCCACCAGAGCGTCATTATGGAATATCGACTGGGCTGGCTGCAAGAGCACCGGCACACATGTCAATAACTGGAGCGAGAGAGTCTCATGATGATATCAGACTTTTCGGCAAATCACTGCCCCTGACACGCGAAGGCTCCCCGATAACTATAATGAAACACGAAGAGCTAGAGTATCTAAGAGAGAGAGGTATTATTCCAACCAAGCGTACATCTGCTATTAAGAACCAATCGAAGAATACAAGACCATCCTCTGTTGACTCAGTGATTCACAGATCATTTTTAACTGAAAGACAACAACAACTTTCGTCATCGTTAGGTGATTTGCGTAACCTTTCCGAATTGCATCTGAGCCCTAGCTTGCCCATTTCACCTGTTTCTGCATCTCATACTTCCAAGAAAACATTCATGTTTCGCCCATGGGAACGAGCAGAAACAGAGGAAGATACTTTGTCTTGGAAAGATGCACCGAGCCCCCCTGCAGCAACGCAATCATTACCAAAAGATAAAGTTGGTTTGCTTAAAGTTGGACTGTTAGAGACAGGGGCTGATGAAAGGCGATCATCAACAGGCGTTGATAGCACGTATGATGAGCCATTAATGTCACCAACGATTCCGTACACAGATCGAGCTAGGGATACTCCAGTTAAGGATATAACCTCTTCCACTGGCAACAGTCCTTCGTTTTTTGCTGCAGAGTCGACCCTAGGCAGCATTACCCCAACGACAGAAGAGGGCAAAGTCTATTATGCTCCGCCCGTGGAACCATTGAAAAGAACACCTAACTCTAATTTAGATGAGCGACCTCAAAGTCCTGTTGATTCTGAAGCAACGTTGTCTGCAGATGAGGCTGAAATGGAGATGATGAGAGAGACCCTACATGAACGAGAAAGAAGCGCTAATTTGGATGATAGTTACAGAGACAGAGAGACCGCTGAAGCGGGACTATCTCCTGTTACTAATATTGGTGAATTAGGCTCATTTGCAGCACCCGAAAAGGTTGTTGACTTAGAGTTCACGGTTAATAAGATCGCATTAGTTAAAGACAGTCACggaggttttgagaaaattcaaattgaaagGCATCATGAACAACATGATCTATCAGCTGATTTAGAAGTGTCAAAAATAACAGATCAACAAGAGCAGATAGTAAAAGGCAAGAGGAAACAGAAATCCGGTCCaagaggaaagaaaaagagCCCAAAAAGAATTGATCAAGGAAATGTTGATGAATCTATGTCGGGAGTTAAAGCAGACAAATCTCATATTACATCTACTCTTTTAAGTGAACTTGGAACTGACTCCTCGGGAGTTATACCATCTTTTTTGCCTAGAAGTGAAGCTGTATCGGAGCAAGCTATATCGTTGCCAGAAACTAATCGTGAGCCAGAAACCGCCAGAACTTCCGGAGATAAAAACGAACCAGTGCAGATTCCGCCCCCTGTTCTAAATGTCTCTCCGGTTAGCCTCTTTGATGACGTCACTTCTTCAGCAGCAAGTGGAGAAAAAGAGACGACTTCCGTTGCAGAACCGGAAGAGGACGACATGAAAGCAAGCAGACCGGAAGGCGAGGAGAAAATTTCAAACGAGAGTGATGGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q60974	Nuclear receptor corepressor 1 OS=Mus musculus OX=10090 GN=Ncor1 PE=1 SV=1
O75376	Nuclear receptor corepressor 1 OS=Homo sapiens OX=9606 GN=NCOR1 PE=1 SV=2
Q9Y618	Nuclear receptor corepressor 2 OS=Homo sapiens OX=9606 GN=NCOR2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002923 (this species only)
Transcription factor family	MYB · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00249 all species →	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001005 all species →	Domain	SANT/Myb domain	Interproscan
IPR017884 all species →	Domain	SANT domain	Interproscan
IPR051571 all species →	Family	Nuclear receptor corepressor	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13992 all species →	NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04650	NCOR1, N-CoR; nuclear receptor co-repressor 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.