Gene detail

Detailed information of ENSSJYP00000002084.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047122830.1, echinoderm microtubule-associated protein-like 6 [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000002155

TTTTGAAGTATCAAAGGAACATCATATGGATTTACAGAGAAACACAGGACACAACTGCATGGTGGAGATATGATATTGCATTTAGACGCAAAGCAGAACTGAGACAGATTCAAGATTGGAGCTACATTGATAGAGATCTTTACAACACTGCCACATCAGAAAGAGCCAGGGAGGGGCTATCTTGTCTGCCTTGCCTCAGTAAAGAGCATGTCCTCAAAAGATGCCCATTTGGTGAAGGAGCAAGAACAGGGTATCCagttgttgatgttgatgggTCTCACTCACTGATCAATGAAGCCATGGACAGAGCACTTGCTAACCCAGAGAAGCTTCTTAAGAAACCAAATGATGGTCTAAGACTCAAATTTGCATTTGGGTACCATGGCTATAATGCTTGCAACAACATATTCTATAcacaaagcaatgaaattgtaTTTCACACTGCTGGACTTGGCATTGTCTACAGTCCAAAGACCCATGAACAAAGATTCTACAGTGGCCATGATGATGACGTCCTCTGCTTAACAATTCATGATGATCAGGATTTTGTTGCTACAGGACAGATTGGTAAGAACCCATCTACTCATGTCTGGGATGCAAGAAGCATGAAACCAATTGCTATTCTCAAAGGGTTTCACAAACGTGGGATAATCTGTGTTGATTTCTCAGGTGATGGTAACATGCTAGCTGATGTTGGTATGGATGATGATCATTGCATTTGTGTTTGGGACTggagaaaacaagaaaagatcGCCTCTACAAGGGGACATAAAGATGTTATCTATAATCTTGAATGGAACCCATACGAAGTAAACTTTTTTGTCAGTGTTGGTGTAAAGCATATCAAGTTTTGGACCGTAGAAGGCAAAAAGATAATGAAGCGCACGGCAACGTTCGGTAAAGCCGGAGAGTTATCCGATATGCTCTGTGTTTGTCATAGTCCATACGAGCAGTTGTGTTACGCTGGGAGTTCAACTGGTGAAATATACGTTTGGCAAGGGTCAACGTTCCGTAAGAGAATGCCAGCTCATAAAGGCCCGGTTTATGCTATGTTTGCATTGTTGCAATCAGATGAAAAGGGATTCGTAACTGGAGGCAAAGATGGTGTAGTTGTCTTGTGGGATGAGATGTTCACTCAACcgttacgtgcatttcaaattgaaacatcGAAGTTCCCACCTGGGACCATCCTGCTACATGAGAATCCACCAATCAGGTCTCTGCATACGGATGAAGGAAGGATTATTGTTGGTACAGGGCATGATGACATTATTCAAATCTTTGCAGATGGCTCAATGGAAGTGATATTGCagGGTCATGGTGAAGGCGAGCTGTGGGGATTAGCAGTGCACCCCCGTGAACCAGAATGTGCCACTGTCAGTGATGATAAGACGCTGCGAATATGGAATCTAATCGAATACCAAATGAAGCGTGTCGCCGTTTTACGAAAAGGAGGCCGTTGCCTTGACTACCATCCAACTGGAGACACTATAGCTGTTGGCTTAAATGACGGAAGCTTTATGATCGTTGATTCAAGATCACTACAGACTTTGGTTCATTTGAAGGacagaaaagaagaaatttccGATATCAAATTTTCGCCTGATGGAAAATTCGTCGGAGTTGCATCGCACGATAACATGTTGGATATCTACAGTgtaaaaagaggaaaaagatGTACAACATGTACTGGGAATTCAAGCTATTTAACCCATTTTGATTGGGATAGAAGAGGTGAAATGATTCAAACGAATTCAGGTGCAAGAGAACATCTTCTATTCGAGGCACCATCTGGAAAACGCAAGACTATGAGCATCAATGCGATAACAAGAGTTGATTGGGCATCATTCACCTGCGTCATTGGCCCAACTGTAAGAGGTGTGTTTCCGCCATTTACTGACGTCACAGATGTCAATGCTACTTGTAGAACAAAGGATTATAAACTGATTGCAACTGGGGATGACTTTGGCCAAGTAAAACTGTTCCAGTACCCAGTACTTcAAAAAGGCGCTCGATCACGTGTATATAAAGGCCATTGCAGTCATGTGACCAACGTCAGATGGACACCCGATGACAAAACATTGTTATCTACCGGGGGCATGGACGCTAGTCTGTTAGTGTGGGAAAGAATTGATGTTGGTCCAGAAGATGATAATGGGCCAGAAGGGAAAATTCAACCGAAGTTTTTACCAAGTGGAACTATCAAGAATCCTGTATCAAAAGGCAAGCCTGTATGGGATGATTGAATGTATCGCAGCCGTTTTATATGGACAGAATTGATAGATCGCAACTCTACAATTGGCACAAGCCAGGGCTGAGGTTATTCGATATGGTAAGGAGCTTTATGCTGATGTTAGCAATCAATCATTTAGTTGGCCAGTCATCACGAACGATGCAAAACAGAAAAGGGTGCCATGAAAGGAAGCCTGTGTCACTGACGATGAGAGTACCAAAGCACCGTCTGGGgcaaattgatatttttcatgtgCTAGGAACTTCCTCGTTAACCCTTTAACCCCCTATGATTATGCAGCTATACAGTGACATTAAAAGCGTCTGCAAATACcacaagggggtacaagaattaaTAGTACTGAAGCCTGTATTTCTAGGGATAAGACTCCCCCTTTAATGAACCAACCAAAGTTTTCC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZMW3	Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens OX=9606 GN=EML6 PE=1 SV=2
Q5SQM0	Echinoderm microtubule-associated protein-like 6 OS=Mus musculus OX=10090 GN=Eml6 PE=2 SV=1
Q05BV3	Echinoderm microtubule-associated protein-like 5 OS=Homo sapiens OX=9606 GN=EML5 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001632 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF12894 all species →	ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	Repeat	Interproscan
PF03451 all species →	HELP	HELP motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR050630 all species →	Family	WD repeat Echinoderm Microtubule-associated Protein-like	Interproscan
IPR024977 all species →	Domain	Anaphase-promoting complex subunit 4-like, WD40 domain	Interproscan
IPR005108 all species →	Conserved_site	HELP motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13720 all species →	WD-40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000002084.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.