Gene detail

Detailed information of ENSSJYP00000002649.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_046839288.1, inactive tyrosine-protein kinase transmembrane receptor ROR1-like isoform X1 [Xenia sp. Carnegie-2017]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000002740

ATGGATCGACGCTCAGCTAGTGGCCTTCTCACCTCCATCATCTGGCTATCGATGTTGCTGAAAGCCGATAGTAAACAAGCCCAAGCATTAACTGGAAAATGTGAGCTGTATAGTGGAACTTCTTGCAAAGCCTATCTGAAGGGGAAGCATGTATTCGTTAAGAATGGTGAAAATCAGAATGTCGTGGAGAAGACAATTATCAAATGGTTCAATACAGCTCATAAAATTAGTGGTATGTCACACCGATGTTGGCCCCATGCCAAAGCTCTTCTATGTTTCCACACTTTTCCTCTCTGTGGCAGCGACAAGAAAACGCCAGCAAATAGACGTTTCTGCCAGGACGAATGCAGATTTCTTGAACAGTACGTGTgcagaaatgaattttatataGCTAAAGGATTAAGTACCATCAGCCAATTTGTACCATCGTGTGGTACCCTGCCTAAACCTGGCACACCAGGCCACTCTGATTGCTTGAAGCTGCCCACTCTGGATGAATCGAGTTTTCCTCGCAAACCATCTGTTGCCTACACTTTGAATGTACGTGGAGCTGTCAATGACCGTGCTGCACTGAAGTGTTTCTTCAAAGTCTACCAACATGGCCGAAGAACTAATGATGTTGTTGTTAGGTGGAACAAGAACAACGTGACGTTAAGCCCAACGATGAAGCGTTACAGATTCAAGAGGAGAAACAGAGCAAATTTCCTaatGATTTCAACGCTTATAATAAAACAAGTGAGATTAAAAGATGCTGGTCGCTATGAATGTCAAGCAACCCAAGGCAAGGCGTCAGCAAAAAGTGGCGTGTATCTTACAGTTATGCAAGGTCCTATAAAGCGACCAGAAGAGAAAGGCGAGAACAAGAAAAGGGACGGACGCAATCGGAATGAAAAGGAAGGCAGCACTGAAGGTCCCTACGGAAATGCTTTTGGTAAATGTGAACCTTACAGAGGTGGAGTTTGCGCCAAATACCTGAAAGGCAAAGGAATGAATACTGTATTTGAATATCGTTACAGTCCACAGAGTTCAGTGGAAAGACAACTCGTTCGCGagtttaaaaagttaaaagaaagTAAACTGTTTTCTGACAGATGCCTTGAGATGGGTTTTGCAGTGATGTGTTTTAACGTATTTCACACGTGCAATAAAACAGCTCGGACGCCGGCTTCACGCCTTTGTCACGAAGATTGCTATCTCTTTGATAAAGTGCATTGCAAATACGAAGTGGAAATGGCTCGAAAACATAGCAGTGCTTATGAATTCCTGCCTGATTGCAAAGCCTTGCCAAAAGGGAACAAACTTTGCGAACCGATGCATGATTTCGTTTTTGGCATgaacaataacaaaacaaatgGCACAAAGTGCTACAAGGGTGTAGGTAAAGATTATGATGGTAAAGTCAATATGAGCAAAACAGGAAAATCATGCAAGCCATGGATTGAGCATTCTTCAGTTTATAAATTCACACACAATTATTGCCGAAATTTTGGTGGAGAAAACATTGCTCCATGGTGTTTTGTTGATGGCGGAAAGAAAGAATTCTGCAGAATTCCTAAATGTGAACAACCTTCAACAGaATCTCCATACGCTAGTTGCTATCATGGCAGAGGCGAAGATTACCGTGGTCAAGTGAAAGTATCGCAGTCAGGAAAACCTTGCATTCAATGGAACTTGATTGGCACTTATGAAACAAGGCACAGCTATTGTAGAAATTATGGTGGAGAGAGAGAGGCTCCTTGGTGCTTCATAAGTAAAGATAAAAAGGAATATTGTGATGTGCCAAAGTGCCTTCTAACTGCTAAAGTCACGAAGAGTGCACCATCGCTTGTCTATTATGTGGTACCGGTTGCTATAGCATTGTCTGTTTTACTTCTGGTTGTATTGATTTTGCTAGTCTATCTGAAACAACGACGAAAAGGTGATCCAGCTGATGCTACCGCAGCGCAGGCGAACAACGAGAACACCGTGGTAGTTGGCACCGCAAGGGTTAGCAAGCAAGACATCGGAAGCCCGCGTGTCCCCGGGCCACTGGACAAGGTATCTTCTATACGTGCAGGTACCGGAAGTTAA

Transcript

ENSSJYT00000002740

CTGGAAATCGAATGGCAGCCTGTGTTTACAAGGCAATGTGAAACTAGAATATAACTAGATAGCCCCCAAAATACTTAGATTTAGACCGCCGTTTCAAGTTACATTCAGTGGAGTTGTTGTGGATTCTGCCTGGCACGCTAGATGGATCGACGCTCAGCTAGTGGCCTTCTCACCTCCATCATCTGGCTATCGATGTTGCTGAAAGCCGATAGTAAACAAGCCCAAGCATTAACTGGAAAATGTGAGCTGTATAGTGGAACTTCTTGCAAAGCCTATCTGAAGGGGAAGCATGTATTCGTTAAGAATGGTGAAAATCAGAATGTCGTGGAGAAGACAATTATCAAATGGTTCAATACAGCTCATAAAATTAGTGGTATGTCACACCGATGTTGGCCCCATGCCAAAGCTCTTCTATGTTTCCACACTTTTCCTCTCTGTGGCAGCGACAAGAAAACGCCAGCAAATAGACGTTTCTGCCAGGACGAATGCAGATTTCTTGAACAGTACGTGTgcagaaatgaattttatataGCTAAAGGATTAAGTACCATCAGCCAATTTGTACCATCGTGTGGTACCCTGCCTAAACCTGGCACACCAGGCCACTCTGATTGCTTGAAGCTGCCCACTCTGGATGAATCGAGTTTTCCTCGCAAACCATCTGTTGCCTACACTTTGAATGTACGTGGAGCTGTCAATGACCGTGCTGCACTGAAGTGTTTCTTCAAAGTCTACCAACATGGCCGAAGAACTAATGATGTTGTTGTTAGGTGGAACAAGAACAACGTGACGTTAAGCCCAACGATGAAGCGTTACAGATTCAAGAGGAGAAACAGAGCAAATTTCCTaatGATTTCAACGCTTATAATAAAACAAGTGAGATTAAAAGATGCTGGTCGCTATGAATGTCAAGCAACCCAAGGCAAGGCGTCAGCAAAAAGTGGCGTGTATCTTACAGTTATGCAAGGTCCTATAAAGCGACCAGAAGAGAAAGGCGAGAACAAGAAAAGGGACGGACGCAATCGGAATGAAAAGGAAGGCAGCACTGAAGGTCCCTACGGAAATGCTTTTGGTAAATGTGAACCTTACAGAGGTGGAGTTTGCGCCAAATACCTGAAAGGCAAAGGAATGAATACTGTATTTGAATATCGTTACAGTCCACAGAGTTCAGTGGAAAGACAACTCGTTCGCGagtttaaaaagttaaaagaaagTAAACTGTTTTCTGACAGATGCCTTGAGATGGGTTTTGCAGTGATGTGTTTTAACGTATTTCACACGTGCAATAAAACAGCTCGGACGCCGGCTTCACGCCTTTGTCACGAAGATTGCTATCTCTTTGATAAAGTGCATTGCAAATACGAAGTGGAAATGGCTCGAAAACATAGCAGTGCTTATGAATTCCTGCCTGATTGCAAAGCCTTGCCAAAAGGGAACAAACTTTGCGAACCGATGCATGATTTCGTTTTTGGCATgaacaataacaaaacaaatgGCACAAAGTGCTACAAGGGTGTAGGTAAAGATTATGATGGTAAAGTCAATATGAGCAAAACAGGAAAATCATGCAAGCCATGGATTGAGCATTCTTCAGTTTATAAATTCACACACAATTATTGCCGAAATTTTGGTGGAGAAAACATTGCTCCATGGTGTTTTGTTGATGGCGGAAAGAAAGAATTCTGCAGAATTCCTAAATGTGAACAACCTTCAACAGaATCTCCATACGCTAGTTGCTATCATGGCAGAGGCGAAGATTACCGTGGTCAAGTGAAAGTATCGCAGTCAGGAAAACCTTGCATTCAATGGAACTTGATTGGCACTTATGAAACAAGGCACAGCTATTGTAGAAATTATGGTGGAGAGAGAGAGGCTCCTTGGTGCTTCATAAGTAAAGATAAAAAGGAATATTGTGATGTGCCAAAGTGCCTTCTAACTGCTAAAGTCACGAAGAGTGCACCATCGCTTGTCTATTATGTGGTACCGGTTGCTATAGCATTGTCTGTTTTACTTCTGGTTGTATTGATTTTGCTAGTCTATCTGAAACAACGACGAAAAGGTGATCCAGCTGATGCTACCGCAGCGCAGGCGAACAACGAGAACACCGTGGTAGTTGGCACCGCAAGGGTTAGCAAGCAAGACATCGGAAGCCCGCGTGTCCCCGGGCCACTGGACAAGGTATCTTCTATACGTGCAGGTACCGGAAGTTAACGATTGCTCCGTTAATTTCTTGGAAATGATTGGAAAAGGTTTCTTCATGGAACTTTGGAAAGCGGAACTGATTGAAACAGATCAGATTGTAACACCACTGCTGGTGAAGCGTCTCAGTCCAGATGCAACCAAGGGATTAATAAACGCTTTTAACCTTGAAATAAGTACCGTACGCGGTTTGGATCATCCAAATATATCAGAGCTGCTATGCGTATCGAGCCAAGGCGTAGTACCGTTCCTCGGGTACGGTGGTGACAGTGAGAGAGACCTCAAGACGTGCCTTAGTAACTCTAGGCCAGATTCAGAATTGGAGAATAGATTTCAATCGGTAGATTTTGACGTGCTAATAGACATGGCTGTGCAAATTGCAAACGGACTAGCCTACCTCCATGAAAATAACATTATACACAAAGATGTCGGTACCCGTAGCTGTTTGATAGAGAATGATGGAACGATCAAAATTGCTCATTTCGGAATTGGGCTCTATTTGCATCCAGGAGACTATTACCATGACAACTACATGACTCTTCCCGCTAGATGGATGTCACCAGAGACACTACAGacgaaaattttcaacaaaagcaATGACGTATGGTCGTTGGGAGTCTTGCTATGggaattgttttcatttgccGATAAACCATATGGGGATATTTCTGATAAGGAGGCAATGGCTTTGATTTCCAGTGGACAACTGCTAAACTGCCCTGATGATTGCCCGGCTAGTTTATACACTCTGATGAAGGATTGTTGGACTATGACGGCGAAAGAGAGAGTTCTTTTAAATGAGGTATTGAAAAGGCTTAATTCTTGGAATGGTACTGTTTGCTAGGATATTTGACAATTTTCTCAGAATGTTACGATCTGCGATGTTCTTGGATGTTCACTGTATTGATGACAGGAAAAGATCAGCTAGGAAAAGCTGCTGAAGGGTGATATGAAATGCTTTGGCATCACATAAAGACTATGGCTGTAGCTGTTTCCAGGAACAGGATCCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P20918	Plasminogen OS=Mus musculus OX=10090 GN=Plg PE=1 SV=3
Q01973	Inactive tyrosine-protein kinase transmembrane receptor ROR1 OS=Homo sapiens OX=9606 GN=ROR1 PE=1 SV=2
Q9Z139	Inactive tyrosine-protein kinase transmembrane receptor ROR1 OS=Mus musculus OX=10090 GN=Ror1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001743 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01392 all species →	Fz	Fz domain	Domain	Interproscan
PF00051 all species →	Kringle	Kringle domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018056 all species →	Conserved_site	Kringle, conserved site	Interproscan
IPR038178 all species →	Homologous_superfamily	Kringle superfamily	Interproscan
IPR000001 all species →	Domain	Kringle	Interproscan
IPR036790 all species →	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR050759 all species →	Family	Serine proteases and regulators with kringle domains	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR013806 all species →	Homologous_superfamily	Kringle-like fold	Interproscan
IPR020067 all species →	Domain	Frizzled domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24261 all species →	PLASMINOGEN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004175 all species →	Molecular Function	endopeptidase activity	Interproscan
GO:0005102 all species →	Molecular Function	signaling receptor binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000002649.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.