Gene detail

Detailed information of ENSSJYP00000002870.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_001626437.2, ATP synthase subunit beta, mitochondrial [Nematostella vectensis]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000002968

CATGCGTCGACTAGTCCCTCGCTTTCCTCTACGGCCATGTTGAGACAGGGATTGAGAAGGCTAGCAAGCGGCGCTGTAAAACCAGCGCTTCTACAGCGCTCGGTAACTAGAGCACAGCAAAGGTTGCTTCCAGCATGTGTTCAATACAtaaaacaaagaaatgtcACAACTGATACTACAAAGAACAGAGCAGCAGCTGcatcagaaaaaacagaattgCCAAAGGCAGCAACACACAATGGACAAATTGTAGCTGTCATTGGTGCTGTTGTTGATGTACAATTTGATGGTGAATTACCACCCATTCTTAATGCACTTGAAGTACAAGGCAGAACATCAAGATTGGTCTTAGAAGTAGCTCAACATTTAggTGAAAATGTTGTTCGAACAATTGCCATGGATGGTACTGAAGGTCTTATTCGTGGTCAAAGAGTCCTTGACACCGGTGGACCAATTAGGATTCCTGTTGGACCAGAAACTTTGGGAAGGATTATGAACGTTATTGGAGAAGCCATTGATGAAAGAGGTCCAATCCCAACCGATAGAAGAGCACCAATCCACGCAGAAGCACCAGAGTTTGTTGAAATGAATGTCAACCAAGAAATTCTTGAAACTGGTATCAAAGTTGTAGATTTACTTGCACCATATGCAAAGGGAGGAAAAATTGGTCTCTTTGGAGGTGCAGGTGTAGGAAAAACTGTGTTGATCATGGAACTGATTAACAATGTTGCAAAAGCTCATGGTGGTTATTCAGTGTTTGCTGGTGTAGGGGAAAGAACACGTGAAGGAAATGACTTGTATCATGAAATGATTGAGTCTGGTGTCATTGATTTGAAAGGAAGTGGGTCAAAGGTATCTCTTGTATACGGTCAGATGAATGAGCCCCCAGGTGCAAGAGCTCGTGTTGCCCTGACTGGATTGACTGTTGCCGAATATTTCAGAGATCAAGAAGGACAAGATGTGTTGTTGTTTATTGACAACATTTTCAGGTTCACACAGGCAGGATCAGAAGTATCTGCTTTGCTTGGTCGTATCCCATCTGCTGTAGGTTACCAACCAACATTGGCAACTGATATGGGTACTATGCAGGAAAGAATTACAACCACCAAGAAAGGTTCCATCACATCAGTACAGGCTATCTATGTGCCTGCTGATGACTTGACAGATCCTGCCCCAGCAACAACATTTGCTCACTTGGATGCCACCACTGTATTGTCTCGTGGCATTTCAGAGTTGGGTATTTACCCAGCTGTGGATCCTCTTGATTCTACATCACGTATCATGGACCCAAATGTCGTCGGAATGGAACATTATGAAATTGCAAGATCAACACAAAAGATACTGCAGGACTACAAATCATTGCAAGATATCATTGCTATCCTTGGTATGGATGAATTATCTGAGGATGACAAACTGACTGTCGCAAGAGCAAGAAAGATCCAGAAATTCCTATCACAACCCTTCCAAGTTGCTGAGGTCTTCACAGGACATCTTGGAAAGCTTGTCCCACTATCTgAATCCATTTCCggttttaagaaaattttatcaggaGAATTAGATCATTTGCCTGAAGTAGCATTTTACATGGTTGGTGACATCGAAGAAGTGGTTGCCAAAGCAGAAAGACTTGCCGCAGAAAATTAGATTCATTATTCAATAGAAGCAGCATAAATTTACACATTTTGTGCCAGAATTATTTCAACttgtaaaatttaatgtttcaaTGTGTGTTGTACGATTCAGGCTTGTTTTGATTGAGAAAAGTTAACCattatttttactttgttttagcTCCTTATCATCTTTTGCTTTCCTCTGTAACCCATTTGTGATATGTGCATGTTTCCTTAGTAAACGTTCCATGCCCCTAAACTCAAATATTGACAACGTTTTCTATGGATTAAGCCAAAGCACCTTCAGATTGAGTGAATAGTTTACCTACAGCAATGAGGGAAGAATGGCATGTTTAGCCTGAAAACCCAATGGATTGAAGCCTAGAAGGACTATTTATTAAACATTCTAAATTGCACGAAAAACGTCTTGCGTTTGTTGCacgatttgaaaatatcagaaGTAGATAGGGGTTGCTAAGATTTTCCCACTTCATGGCTACTGTCTGGATCGAAAGCAAAAGAACAATTGTATGCTCagattctttattttcaaattatttctaGTTGTCACCTACTTTCCAACTCTGCGATACAGGCCTTATGTCTTCCTGCACAGCTCCGTATTCACATGAAAGTGCATAAAATATACGCCATTTGTTACGCTGCCCCATCTAAACAGATCGCCCTTCATAAACGGATATTATGTTTGCAACAGGCTTGTTGTGACAGGCTTACACATTTGGCACAGAAAAACGCTATTGGGCTGACCGAGAGGCAGTATATGCAAGGTGGTGGATACGGAGCAAGAAAGTTCTATTTGTCCAAAATAACATCTTTCAGTAAATTCTAAACACAGTAAAACATTGGAAACTCTTGAAATAAGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P10719	ATP synthase F(1) complex catalytic subunit beta, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5f1b PE=1 SV=2
P56480	ATP synthase F(1) complex catalytic subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Atp5f1b PE=1 SV=2
P00829	ATP synthase F(1) complex catalytic subunit beta, mitochondrial OS=Bos taurus OX=9913 GN=ATP5F1B PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003927 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00006 all species →	ATP-synt_ab	ATP synthase alpha/beta family, nucleotide-binding domain	Domain	Interproscan
PF02874 all species →	ATP-synt_ab_N	ATP synthase alpha/beta family, beta-barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000194 all species →	Domain	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR050053 all species →	Family	ATPase alpha/beta chains	Interproscan
IPR005722 all species →	Family	ATP synthase, F1 complex, beta subunit	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR020003 all species →	Active_site	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Interproscan
IPR004100 all species →	Domain	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Interproscan
IPR024034 all species →	Homologous_superfamily	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	Interproscan
IPR036121 all species →	Homologous_superfamily	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15184 all species →	ATP SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005753 all species →	Cellular Component	obsolete mitochondrial proton-transporting ATP synthase complex	Interproscan
GO:0042776 all species →	Biological Process	proton motive force-driven mitochondrial ATP synthesis	Interproscan
GO:0045261 all species →	Cellular Component	proton-transporting ATP synthase complex, catalytic core F(1)	Interproscan
GO:0046933 all species →	Molecular Function	proton-transporting ATP synthase activity, rotational mechanism	Interproscan
GO:0015986 all species →	Biological Process	proton motive force-driven ATP synthesis	Interproscan
GO:0046034 all species →	Biological Process	ATP metabolic process	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02133	ATPeF1B, ATP5B, ATP2; F-type H+-transporting ATPase subunit beta	EC:7.1.2.2	Diabetic cardiomyopathy	ko05415	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.