Detailed information of ENSSJYP00000002995.1 in Catostylus mosaicus

Genomic Location: chr1:13722192...13729363
NR annotation: no NCBI-NR hit recorded
Species Catostylus mosaicus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0012545 (this species only) · gene tree & orthology
Transcription factor familyHTH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221
all species →
HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF01710
all species →
HTH_Tnp_IS630TransposaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600
all species →
DomainHTH CenpB-type DNA-binding domainInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR002622
all species →
DomainTransposase, Synechocystis PCC 6803Interproscan
IPR009057
all species →
Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR051839
all species →
FamilyRetinal determination transcriptional regulatorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33215
all species →
PROTEIN DISTAL ANTENNAInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for ENSSJYP00000002995.1 in Catostylus mosaicus.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSJYP00000002995.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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