Gene detail

Detailed information of ENSSJYP00000003350.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_049600921.1, zinc finger protein sens-like [Syngnathus scovelli]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000003465

ATTCTGTGCAAGTTCGTGCGCATGAATCGAGAGCTGAGGCTGAAGTGGGCATAAAAGACATAAAAACGCAACAGACGAATAATTGAAGGGTggaaaataaaggaaagaaGATGCCGAGAGCATTTCTGCTGAAACGgagcaaaaaaatcaaagatgaaatCTTTGGCGGCAAAGGAGCTGAGATTCAACCGCAAGAAAGATCAGATTATCTGAAATCACCAAACCAAGATAAACTTAAAGACAGCAAGGATCACAGCGATCAAGCCGCAGTAAAACTGGCAAAAGTCAACCCGTTTCTCAGCTTTCTACCAAAAAATGCTGAGATCAATATCGACCCAAAAGAGGAAATTCGCATCAGAGAGGATCATGGCACCATTTTTAATACGCCTCCTTTTCATCCTGCCTCCAGGTTTTTTCTGCCGATTCCAATAAAGCAACCACCACTACACGAAAAGGATGCTATAATGTTGAAGAACTTTTCTGAACGATATTTATACCCAAGACCAAGCCCAGTGAAAGCTCTCGAGCCGATAAACAACAACGGAGCATTTTTCAACTACCAACAATTCTTTGACCGGCTAAAGAAACCTACACAAGACTCTCCTGACGAACTTTATCACCACACCTATTCAGCATTATCCCCCGTCGACCGCAACTACCCGCGCGTCTACCCTTGCAAAGTCTGCGGCAAGTCCTTCAAGCGTTCGTCCACGCTGTCAACCCACATGATGATTCACGCGAATATCCGCCCTTTCGCGTGTAATTTTTGCGGTAAGCGCTTCCACCAAAAGTCAGATATGCGAAAGCATACGTACATCCACACGGGCGAGAAGCCGCATCAGTGTGGCTTCTGCGGTAAGTCATTCAGTCAATCATCGAACCTCATCACGCATTCGCGGAAACACAAGGGTTTCAAGCCATTCTCATGCGAGCGGTGCGGCAAAGCGTTTCAACACAAAGTTGAACTGAGAAAGCATACGTACACACACATCACATCGGGCAAGAACGAACAAGCGGAAAGCGTCAAGGATGTTACTCAATGAACTTCGTTGCTGGTGTCATTCTGCCTCAttgcttttcaatttgattacaGATATTAGAAAATCGCTCAATGCGTTGACCCAAGCCCATCGCATGCGTTGTTAGAAAATTCTTAATCCCCCTGTACCCTGTACACGGCTAAACGTACCCTGTTCCCTGTATCCTGCTCCCTGTTCCCTGTTCCCTGCTCCTTGTTGCCTGCTCCTTGTTCCCTGCTCCCTATACCCTCTTTGTGCTTTTATAAGAGGGATCTATACGAACAGACTGGGTCAGACACATACCTAAGGCACAATCACGAGGGCGTGAATGGAAATAAATTACGATGTTTTCTATCATTAACTTGCTGTGCAGCTAGTAGATTTTTGTAGACTAAATAGCGTCTTGCATGAGCAATGAACAATACCTCTATTGATTCAACACTTAAGCTGTAAAGCATAACCATTTTTAGAAACCTCCACTTGGCTACATCATCACTGCTGCGTTAGAATCGCCGGGTAGATTCTCCAGCAAGAGTAGAATAATCCTTCGACCTATTACTACCCgaaaaaaccatattttcCAGCCTTTTTCAACAAAGAAGTTACACAGAGGCTGTCATTCTTATCGTTACAGAGTACAGAACTGATCTTACTTGAAAAGTTTGACCCTGCTAGAAAGCATAACCAAGTAGTCATAACTGACTTATTcactttgattttattaaaaatcgaCAGCCGAATAGGTTGaattaatgtttataaataCCATTCAAGCCATTGTATTCTACAACGGGTTCAAAAACTAACGAGTCAGGCCAAGAACACAACAAGCGTATGTTTCACAATCTTCGCCTGAAAACTATCTTATAATATTCTCTCATATTACATGATCTaatgaaagaaattgcaaaacagAGGTCCATGACCTCCACAATTTGGTAATCTTTTCGATGTAATTTGTACTGTATCGCTCAGACTCAGTTTTCATCTTTTCAAGCCTATTTTTTGTAAACGCATCTGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9N658	Zinc finger protein sens OS=Drosophila melanogaster OX=7227 GN=sens PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004010 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24394 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09223	GFI1; growth factor independent 1	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.