Detailed information of ENSSJYP00000003571.1 in Catostylus mosaicus

Genomic Location: chr10:5372920...5377379
NR annotation: XP_035687270.1, chromodomain-helicase-DNA-binding protein 1-like [Branchiostoma floridae]
Species Catostylus mosaicus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9CXF7Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus OX=10090 GN=Chd1l PE=1 SV=1
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000957 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16759
all species →
LIG3_BRCTDNA ligase 3 BRCT domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036420
all species →
Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR001357
all species →
DomainBRCT domainInterproscan
IPR043472
all species →
Homologous_superfamilyMacro domain-likeInterproscan
IPR031053
all species →
FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR031916
all species →
DomainDNA ligase 3, BRCT domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47157
all species →
CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0006338
all species →
Biological Processchromatin remodelingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSJYP00000003571.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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