Gene detail

Detailed information of ENSSJYP00000003705.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_047142316.1, cytospin-A isoform X6 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSJYT00000003832

TAACGTCATGTTTATCTTTCGGCACTTTGGGAAATGATGGCAAACAAGGCGATGTTCTTATGTTTAAAGCCAGTCACACAAAAGGACTGTAATTGATCCTTGGGATCCCGTTGTCTTCTGTTATGCAAATCACTCATGTCAAGGTTAGCAGAAGAGTTGATGTCAAACGTGAACCTCGTTTTGTATGTCAgttatttgttgctttttaGAGATAGGAAGAGATCTGCAGCCTTGCAAGAGTATTTAAACAGTTTGCCTGACAGCTCGAAACTAGAAAATGTCTTCAATCGTGCGATCAAGCTACTCTTCAAGGCAGACAAGAACAAGCGGTGGTGTTACACGCACTGAGGAAAAATCAGTTACGGAGAAAAAGACAGCATTAGGTGGGACAAGGAAAGAGGACACTAAAGTGACAGTGAAAAAGGATGGGGTGAAAGTTTCTGAAGAGAAATCAAGCAAGGAAGATAAGGTTCCAGGTGTAGGTGCCAGGTCAGGACTTAGAAGGATAAAAGATGTCAATGATAACAAAATCGAAGTGAAAGTTGGTGACAAGAAAGATCTTTCGAAACCAGCTGgttcaaaaattgaatcaaaaggAGCAGAAGCTATTGTTGATTTGAAGGCAGAAGCAGCAAAACGAAGGCAGCGAACGACCATGAACATCGAGCAACGAATGATGGAgcagaaacaaagaaaagctGCCGAGCAGAAGAAAAGAGTTCAAGGAAGACAAGCTTTTAAAGCACAGCTTGAATTAAACGCCCCTGCTAGAAACGGTCCAAACAAGTCATCATTTAAGCGTTCAGCTGATTCAAATATAGAAAGACTGCTTCGATGGACACAGAATCTAACACAATGTTATCCAGGGGTTGAAGTGACTGATTTCAGTGGAAGTTGGGCTGATGGCTTGGCATTATGCGCATTGTTGAATTCACTTTGTCCTGGTGAATTTCCATTGGATAAAATGTCTGAGGATGATCGTAAAGTCAATCTTGATCTTGCCTTTGGATTTGCTACAGAAAAGGGGGTTCCACCATTGATAGAGACATCAGATATTCTACGATCCAAAAATCCAGAGCCGAAGTCGATGATCACATATTTACACACGATTTACAAAGTTCTTGTAGCAGACAAGgcagaaaaagagaaagaagagaaagaggGAAAAGGAAAACAGGATGGAACAGATGAAGACACAAATGGTGATTGATAAACTGATATTGGACTAAAATAATGCGATTTTAATCCTGTAATTACTGTATTATTTGGTAGGAGCTATTGGCTCTCCTTTTAACCCGTTGGTTAATTGATATATCATGGGGGTAGTTATACTTACGTGCAATCTCTATGTTAAGCAGAGAATGAGCGATTAggaaataaagtgaaatacATCCAGGTGAGGTTAGCCTCATTAGCAACATTTAAAACTGCAACATCAAGCGAGGTTAGCCTCATTCGCAACATTTAGACTAATTTTCCTCCTTGTCGGGTAAATcgtaagaataaaaaaatcttcTTTACACGCATCTTTCATCCAAATGAGGTCAGGAGAGGCAATGCCCCCCCTCCTCTTGCTGCAAATGGCATACCTATCTAggtctttttgttttaaatcgtCCCAGCGTGCTCTCCTctcaactttgaaaatatcctCTTCTTGGTGGCTGTTGAAAAACgcttttttgcaaacttggtaatttttttgtcttgtCAGGACAATTTGCCACCTTCCTTCCGACAAGAGGCATGAATTGATGCCCTTGCAggttttattgatttcatttctcatCCATTGTCGCATCCATGTTTAAATTTTACATTGTTCGTTTATTACAATAGTGAATTAGCATTGACCACTTTCATGGTAAATAGGTAagtgtatatatatattttattcaatgcttaataaaattttctttgatatcaagatttttttctttatcgaTTGTTTTTCTAAATCATGGGTGAATTTAGGGGGTTTCACCAACCCTTGACCTTAGGGTGCCCCTACGCCCCC

Protein

Uniprot

Uniprot term	Description
Q5M775	Cytospin-B OS=Homo sapiens OX=9606 GN=SPECC1 PE=1 SV=1
Q5SXY1	Cytospin-B OS=Mus musculus OX=10090 GN=Specc1 PE=1 SV=2
Q2KN96	Cytospin-A OS=Xenopus tropicalis OX=8364 GN=specc1l PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00307	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001715	Domain	Calponin homology domain	Interproscan
IPR036872	Homologous_superfamily	CH domain superfamily	Interproscan
IPR050540	Family	F-actin Monooxygenase Mical	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23167	CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005815	Cellular Component	microtubule organizing center	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0031941	Cellular Component	filamentous actin	Interproscan