Gene detail

Detailed information of ENSSJYP00000003783.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: CAH3198225.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSJYT00000003913

GGAAAGTTACACTAGCAGCAAAATGAAAGAGGAACGTTGCCATtggcaaatgaaatttattatcattttggtGGTAATTGCTCAAACAACTGTTCTTATACTTCACGAAAGTCGTTTGAGAGCAGTTGAACAGCGAGAATCGTCGGCAGTTAAACAGGAAGATTTTAATGGATGGTCCAGCCTAAGCCGGAAGTTAAGCGATTTTAAGGAAGCTGTTGAAAaagTTGAAAGtagagaaaagcaaattcgAAGCAAGCGTAACATAGATGGAGGCACTGCTCAGCTACAGCTACTTCAACACCACGTTACACAGATGCTACTGCtactgaaaagaaatataaaatcatGCAATGCTGTGACAACCCACAATGTAACGACTTGCAGAGAGGGAAGAAGAGGCAAACCTGGTCCACGTGGTCCGAAAGGCGATCGTGGCCTAGCTGGTTTTCCAGGCAGGAGAGGTCCTACAGGTGCAAAAGGAGATAAAGGGGACATTGGACCAAGAGGACCTCCTGGACCTTCAGTCGAAAAGCCTCGAATAAGCGTTCCTTTGAGTAACTCAACTAAAACTGAAGGAAGCACAGCAAcctttttttgcaaagcagAAGGATATCCAAAACCAGTTGTGGAGTGGCAAGTGAAGAATAAAACAGTTTTGCAAAGCACATCAAAGGTTGTTATTGTAGAAGATGGACTTCAAATAAACAGCATCCAAGAGAATGATGCAGGAGAGATCAAATGTACAgcaattaatgtttttggagTTGCAGAATCGACAGCTATTCTGGTCGTACACACCAAACCATCAGCCACTGCCAGTCCACACGAGATTCAAGTCTTTGATGGCTCTGCTCTTTGGTTGAATTGCATTGTTACCGGCAATCCAAAACCAAAGGTAACCTGGAAAAAGCTACTTGGAAATATGCCTAGCAACGCCAGAACAATGCCGAATGGAAAACTGTATATCAGCAGCATCACAAACAAAAACACTGGAATATATCAATGTACAGCAACAAATGTGGTTGGGGTATCAAATGCAGTGTCGCTCGTTTTggtattaaaagGTGTAGGAAAAAGTTGCAAAGATATCAAGGCAAGAAGCAGAAATGCAGCGAATGGCGTTTACACGCTTAGATCTGCTGATCGGgattttcaaGTATACTGCGATATGGTTAATGGCGGATTCACGCTTGTTGCACGTTTCTCAAATGCAGATCAAAGGCAGTGGATGAGACCATCACTTGAATTTTGGTACAGCAAAGATAGTTACGGCAAAACCACTTTAACTAGTCATAATGGTGATATGGTTAATTTAGCCTTCTCAATGGTCAGCGGTGATGATATAAAAGTGAGCCGCAGCGACGATAATAGCCATACGGCATTGCTTTTGGCACCAAAATGTGTAGGCGACATCAGCATGCGCTCGAAAATTGTGGCATACGGGGACTTCAGaaatggtAAACCATGGGGAAGATACAAATGTCTTGGCAGCTGCAAAGCATCGTTTTCGGGTAGTCACAGTTCAACAGCTGGATTCAAACACGCCACTTCATCATGTACAGCAGCAGGTAGTAGCTGGCGAAATACTGATATACTGAATGGCTACAACATTGGATTTTGGTGCGATTATGGCTACCGGAATGGCAATTGGGATGGGTCAGTCTTGATGATTGGCGGTGGTGGAACGTCGTGCGATGGAGCAGATCACGGTATTGGTATCACTGAGGATAACGTACTATCATTTGATATTGATAGACATGATTTTGGAAACAATGCAATGGACAGACAACAGTCAGCTTATGCCTTAAACCTTTGGGTTCGTTAAAGATCAGCAAAGTTCGTTAGCATAAAAAGTTTTGCAGTGACTGTTTCAATGGCAGCCGGTCAGACCTAAGAAATCACTAAATGGCCGGCAGTTTTCTCAACGCATGCGCATATGATGCTACCAATAATATGCTTCCGAAGTCCTTTAGCAATATgtatgaattttgaaatgtgaAAAGTTTCCATTGTCTTTTTATTGCCTCAtgttaatttttcatctttatacGCCAATTTTGGGTCAATTTGCGATGTCTTGGTCCG

Protein

Uniprot

Uniprot term	Description
Q2EY14	Protogenin A OS=Danio rerio OX=7955 GN=prtga PE=2 SV=1
O42414	Neurofascin OS=Gallus gallus OX=9031 GN=NFASC PE=1 SV=1
Q9Z2I4	Roundabout homolog 3 OS=Mus musculus OX=10090 GN=Robo3 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF01391	Collagen	Collagen triple helix repeat (20 copies)	Repeat	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR008160	Repeat	Collagen triple helix repeat	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10075	BASIGIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007411	Biological Process	axon guidance	Interproscan
GO:0030424	Cellular Component	axon	Interproscan
GO:0070593	Biological Process	dendrite self-avoidance	Interproscan
GO:0098632	Molecular Function	cell-cell adhesion mediator activity	Interproscan