Gene detail

Detailed information of ENSSJYP00000003921.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: KAJ7389116.1, Iron-sulfur clusters incorporation protein [Desmophyllum pertusum]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000004055

GTTACAACAGTAGGACGCTCTGGCGAAAGTCGAAGGTTTGTGGTAAAATGCGAATGAATGGTAGTTTAAATCtattaatatttattaaaatacaattataaGATCAAGCAATGATACATTATTCTATAATGAGGTAAACGAATCGCCAGTCTCGCTGCAACTTAAGCTATTAACTCATCTAGGCTCTAGGTCCTATCTAGGCCATTTCTATAAAATGATTGCCAACCCAAGACTGTTTCATCATGCTCTTGTCAAGAATGCTTTTCCCTCTCTTAAAATCTGTATAAGGAGGTATTGTATGGATGTAAAAGGGGCGGCGAGCGTCCCTAAGTTAGCCAAGCTTTCAGACAGGGCCATTTTAAGAATCAAAGGGAAAGACAGTGCAAAATTTCTGCAAGGTATTATTACCAATGATGTGAACCATATGAAAGAGGAGGCTCACAAAAGTTTATATACCATGCTGCTCAATTCTCAAGGAAGGATTTTGTTTGACGCTTTGCTGTATTCAGTTCCTGATGCTactgaagaatatttcttGGAGAGTGATGCAGAAGCGGTTGATGGCATCCTCAAACATTTAAAGATGTACAGATTGCGAGCAAAAGTTGAAATAGAAGATGCAAGCAAAGATGTTGATTCATGGGTGCTGTTTTCTGGAGATGATAACATCGATGTGGATACAATTAATGACAAAAACATCCTTGCTATGAAAGACCCAAGATTGGAATCCCTTGGATTAAGAATAATTGTCCCATGGAACCAGTCACCTGTCAACTTACTCAAAGTTGGAGAGCACATTCCAGTTGGCACTGCTGTCTATAAAGAACACAGATACAAGCAAGGAGTAGCAGAAGGCTTGGGAGAAATGCCATCTGGGAATTCACTACCTCTGGAATACAACCTTGCATTGATAAATGGAGTGAGCTTTTCAAAGGGATGTTACATTGGGCAAGAACTTACTGCAAGAACTCATCATGTTGGTCAGATCAGGAAAAGAATCATGCCACTGCAGCTGATTGTTGAAGAGAAGATAAAACATTATCCTGAGTTTGCACCAGGATCTCCAATAAAAACTGATTCTGGTAAATCTGCAGGTCGTTTAGCTGTTATGAGTGGCCAATATGGACTTGGACTAATAAGGCAGAAAGAACTTAGTGAGTCATCCTATTTGGTTGTCATGGATGTcaatggaaaagaagtgcATGCAACTGCTGCAAGGCCTAGGTGGTGGCCAGATACTGCATAGTTAATGGTAATTCCATTGCATTTATCTAATTAGATTCTAAACTTTTAATGGGTTCTTCATATGATGGTGAACGGCCATAACAGCTAGGCCAATAGGAcaagaaaggaaattaaatACATTGATCTAAATCTAATGTATTAGAAAAAGCATTCCAAATGTTCAAAATTCATAACCTAATCATTATAAAGTCATCAAATGATGATGTCATCCGTTATAActtcattattcttattaatAACTATTACACAACTCCATGAAAACAGTTAACCACTATCAAATAATCATGTCGATGTTGCTAAAAAAGAGGAATTGAAAATGAGAATGATAAACTTGCCATTTGCTGTATCCTGCAAGCTGATGTTTGATGGGTTCTTTATTGATGGTGAATAGACATCAAGGCTAGACCATTGGGCGCTAAACAGATACcctttatatataaatactTTTGATGCTTTAAAGAATGATTCAACAGCAAGACTGCATTATTGGGAAATATTCTATGCCAAAGAGatgacaaaatcaattaatgcATCAATGCCATACATTACAAGGGGTTGACAATAATAGCATACGCTTCGTAAAAAGGCATGCATTAAGTGCAAACATTTGACTTGAACACGCAACTAAATAACtacaaatgaacaaaattaaCCCAACGCACTGCAAAGACCAGGGATGGATGAGATAGACATGGGAGCTTGAACTCGAACATTCACAATTTGTTTAACAGTTGTTCCCGTTAAACGTTATAGCCCAGGAGATGCTTGCAGTAGACAGTTTCCTGTCCaacattcaaaaaaaattaatacggtattttttattgctttcatCGTACTGTTCATCGTTTTGTCCCTACAAGAAACTAATAAACCATTTAGACAAAGTGTCTACCATTTGCATTCCACAAAAACAAGACACTCTGTGATGCTGTCTAGAAGAGTTGAACGGTTAAGATCTTGCTATCGTTTGATCCATGAAGTATACTTTTCTTTCCTATCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B8JMH0	Iron-sulfur cluster assembly factor IBA57, mitochondrial OS=Danio rerio OX=7955 GN=iba57 PE=3 SV=1
Q8CAK1	Iron-sulfur cluster assembly factor IBA57, mitochondrial OS=Mus musculus OX=10090 GN=Iba57 PE=1 SV=1
Q5T440	Iron-sulfur cluster assembly factor IBA57, mitochondrial OS=Homo sapiens OX=9606 GN=IBA57 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008003 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01571 all species →	GCV_T	Aminomethyltransferase folate-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027266 all species →	Homologous_superfamily	GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1	Interproscan
IPR006222 all species →	Domain	Aminomethyltransferase, folate-binding domain	Interproscan
IPR045179 all species →	Family	YgfZ/GcvT	Interproscan
IPR017703 all species →	Conserved_site	YgfZ/GcvT conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22602 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005759 all species →	Cellular Component	mitochondrial matrix	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22073	IBA57; transferase CAF17, mitochondrial	EC:2.1.-.-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.