Gene detail

Detailed information of ENSSJYP00000004449.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_044174531.1, 2-hydroxyacyl-CoA lyase 2-like [Acropora millepora]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000004599

AATAAAATTATGTTTAGCTGTCTGTGTGCTACGTTGCCTAGGGACTTTTTGGATGTGCAAAACTCTTAACCGCTGCAAGGCCATGCATGTTATTGCAGaTTCATTGATCCCGAGCATTTCAAACGAAATTATTTACTATAACACTAACACATGATGATTACAATAAAGACTTGCATGTTAATGCGAGTAAGGGGACCCCTGCTCACAGTTAGTTGTAACCAAGTTGCATTGTGTTGCACAAAAACCAACAACGTGTATTTTGCAAGATACTTCCTTCAAAGAACACTGAAAACTGCTCAGGTCGATGAGAATTCCAAAAGACATGGAGGTGAACTAGTTGCCGATGTTTTACAGTCTCATGgagttaaaaacatttttacactTTGCGGTGGACATATCTCGCCAATTCTAGTCTCATGTGAAAACAAAGGAATCAAAGTGGTTGACACAAGGCATGAGGTGAATGCTGTTTTTGCTGCTGATGCAGTTGCAAGGCTCTCTGGTACTGTGGGTGTTGCTGCTGTCACTGCTGGTccagGACTTACAAATACAGTCACTGCAATTAAGAATGCTCAAATGGCAGAATCACCGTTGTTGTTAATGGGTGGAGCTGCCGCTACATTGCTCAAGgGGAGGGGTGCTTTGCAAGACATTGATCAAATGTGTCTTTTCAAACCCCTCTGCAAATATACTGCAACCATCAAAAGAGTTGCAGATATCATACCAACGTTAAGGAAGGCATTGCAAGCTGCCCAATCTGGCACACCTGGCCCTGTTTTTGTTGAGTTCCCAATCGATGTTCTTTATCCATATCATCTGGTGAAAAGGGAAGCTGGCATAAAGGAAAATCCTGTTGGCTTACTTCCCAAGTTGGTGAATTGGTATATATCAAGACATGTCAACAAGTTATTTGAAGGTGCTTGGGAAAAGCAAGATGTTAATCCTTTGCCCGTTGATATTCCAAAACCCTCTGACAGCCAAGTTTCTGAAGCGGTTTCAATTATTAAGGATTCCAAGAAGCCAATCATTCTTCTTGGAAGCCAAGCTACACTTCCGCCTGTCAGTGCAGACAAATTAAGAGAATCTCTTGAGGCGTTGGGTATTCCGTGTTTTCTTGGTGGTATGTCACGTGGCTTGCTTGGGAAGAACAGTCCCCTGCATATCCGgcaaaagagaagagaagcaTTGAAAGATGCAGATGTCGTCATTTTGGCAGGAACGGTGTGTGATTTTCGCTTATCGTACGGCCGTGTGTTGAACAAGAAGTCAAAAATAATTGCAGTTAATCGAGACAAGCCACAGCTGATGAAGAATGCAAATGTATTTTGGAAGCCAACTTTAGCCGTTCAGGCTGATCCAGCGAGTTTGCTTGTTGCAATTCAGGAAAACATCGGAAGCTTAGAAGTTGACAAACAGTGGAcagaaatgttgaaaaacaGAGATACGGAGAAAGAGGTTATTAACAgcaaaaaagccGAAGAACCTGCGGGTGAATTTTTGAACCCATTGAAAGTTTTGCATCGTTTAGAAGAACGAATGTCTGAGGATTCAATTATTGTTGCAGATGGTGGCGATTTTGTTGGTTCTGCTGCTTACATTTTAAgACCACGTGGCCCATTGCGGTGGCTGGATCCTGGAGCATTTGGCACACTTGGTGTTGGTGGTGGCTTTGCTCTTGGTGCCAAGTTGTGTCGCCCTGATTCAGAAGTTTGGATCATTTATGGAGATGGATCTTGTGCCTACAGCATTGCTGAATTTGATACATTTGCAAGACACAAGTTGCCAGTTATTGCATTGGTTGGAAATGATGCATGTTGGTCACAGATTGCAAGAGAGCAAGTGCCCATGTTTGGAACAGCAATTGGATGTCAGTTGGCGCACACTGATTATGACAAAGTAGCTGAAGGATATGGAGGAGTTGGGTACCAAATTAAAAACGGAACTAATGAAGATATTGATGAGATTTTTGAGAAAGCCAAAGAAATGCAGAAGAAAGATAAACCAGTTTTGATCAATGCTTTGATTGGGAAAACTGATTTCAGAGAAGGATCTATTTCAATTTAGAGAATCCAATGTAAGTGGAATATTTTAATATGAACATTTGACACTTTTAGAATTTTTAACCCGCCAGATTATTGAAGGGAAGTGAAATTGATTAGATAATTATCTTGATAGTCAGTCAATTTTCCAGCGAGAGAATGAATTACCTCGCTACAATTCCATCCAGCCTACTGCGTGAAATGAATTATAGGCTAGAGATTAGGCAAGATAATAAGTTACATTTTGATTCATTATGGATTGATTTGCTCAGCAGATCAAGGAAAGGTcattttttgatgatatttggGATTCCAAGGGGAATTTTTCGGTAATTGAATAATTTCGAACCATGACATTACTTGATTTTGTCATCGGTTCTCACAAAACGTCAATTTTTAGCTGCTTCCTCAAAAGATTAAAGCCCTAAGCTGCTAGGCCAGTTCACTTTTGCCTTGATTaggaataaaaacatttgatctTGCCGGTATCACTCGATTATTAATCTCATAAATGTTTAGTGCCAAGAAAGAAAGACagcaattgaaaatattatccatgattttagattttttttgtgaaagtaATGATAAgcagtttcttttatttgatgatAAGTTTCTCAAATGATGTGACTTTGATTTGAAGCgttgtatttttatcttttttggaAACACACTGTTTCAACATATGAAATAATTTGCAGGATTTATAACGACATCATGACGTTTCATGAAAACTTTTACATTAATGAATAAGATTTGACAAgggataaacacagttttagatataacgatttttaattcattattacaaattaatattaaaatataacGCTAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NV04	2-hydroxyacyl-CoA lyase 2 OS=Danio rerio OX=7955 GN=ilvbl PE=2 SV=1
A6QQT9	2-hydroxyacyl-CoA lyase 2 OS=Bos taurus OX=9913 GN=ILVBL PE=2 SV=2
O61856	2-hydroxyacyl-CoA lyase 2 OS=Caenorhabditis elegans OX=6239 GN=T26C12.1 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004763 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02776 all species →	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	Domain	Interproscan
PF02775 all species →	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Domain	Interproscan
PF00205 all species →	TPP_enzyme_M	Thiamine pyrophosphate enzyme, central domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029061 all species →	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR045229 all species →	Family	Thiamine pyrophosphate enzyme	Interproscan
IPR012001 all species →	Domain	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	Interproscan
IPR011766 all species →	Domain	Thiamine pyrophosphate enzyme, TPP-binding	Interproscan
IPR000399 all species →	Conserved_site	TPP-binding enzyme, conserved site	Interproscan
IPR012000 all species →	Domain	Thiamine pyrophosphate enzyme, central domain	Interproscan
IPR029035 all species →	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18968 all species →	THIAMINE PYROPHOSPHATE ENZYMES	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003984 all species →	Molecular Function	acetolactate synthase activity	Interproscan
GO:0005948 all species →	Cellular Component	acetolactate synthase complex	Interproscan
GO:0009097 all species →	Biological Process	isoleucine biosynthetic process	Interproscan
GO:0009099 all species →	Biological Process	L-valine biosynthetic process	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0030976 all species →	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11259	ILVBL, HACL2; 2-hydroxyacyl-CoA lyase	EC:4.1.2.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.