Gene detail

Detailed information of ENSSJYP00000005007.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: KAJ7333725.1, hypothetical protein OS493_015811 [Desmophyllum pertusum]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

ENSSJYT00000005179

ATGCCATCTAGAAGATATCATCAACCATTTTGTAGAATATTGAATCTTATTcgattcattttcttttctgacCTGGTTGTTTCAAGCGCTCTCTGGCTTGCTGGTGGAGATTCACAGTACCTTGAGGACAATGTCACAAAATTCAAGTTGCATCAATCTGTGTTTGACCTGGCATTGATACGATTTTTACTTGctatttcattcattgcatCATACACAGAACTTGAAAGTCTGACCATTCAAACTGCAACAagagatgaaaataatgaaaaaaacaaaaagaaaaagcaaatttaCTCACTGCTTACCTTTCTATTCACAACTGCAAGTCTTGCATACAGCATAgtgaaatgcatttttatcattcaagAACATAAGAACCATCCAGACAACATTCACACCACATACTACGCCTTGGCTATATCATCTGTGGCATTTTCCGGAGTTGAGTTCctcatctttttcatcaacattgCAATGTTGAGAAAGATGGCAATAAAGTACACCAGAATGGAAGAAGATCTTGATAACTTTTCTGGAGAAGAggggaaaaagaaaaaaaccaaagCAGATTTGCGAAGACTTTTTGGTCTGGCAAAACCAgAGACAATGCTCCTTGTTTTTGGAACACTTGGCCTAATTGTCTCAAGTGGATCAAATATGGTGGCACCtttgttttttggaaaagttgTTGATGCAGCATTGAAACCAACAATGAaaCCTTTGAATGAGACAATCTTGATTCTCTTTGGAATTTATGTAGCCGGTGGATTTGCAGCATTTTTCAGAAGCTGGTTTTATACATTGGCTGGGCAAAGACTTGTTGCTAGATTGAGAAAGAAGCTGTTTTCCCATATCATAAACCaagaaattgcattttttgataCAAACAGAACTGGAGAGTTAATGAACCGGTTGTCATCTGATTCTCAAGTCATTCAAAATGCTGTAACAGTGAACATTTCAATGTTGGTTCGCTATTTGCTTCAAATCATTGGTTCATTGGCCATTATGTTTGCTGTCAGCCCTAAATTGACCGGAGTTCTGCTTGCAGTTGTGCCAATAGTTGCAATCGGTGCTCAAAGATACGGTTCCTACGTGAGAGATATGACAAAGAAGTTTCAAGACAAATTAGCCGATGCATCTACTAATGCGGAGGAGTCAATTGGCAACGTTCGGACAGTGAAATCATTCTCGCAGGAGAAGAAGGCATCGAAATTGTATggaaatgatattgaaaatagTTACAATGTTGGAGCGACCCTAGCTCTTGCATCAGGTGCTTGGAATGCAACAATGGCAATTTTCGCTCAGGGTGCGATAGTTTTGGTTTTATGGTACGGTGGTAAACTTGTTCACATTGGTGACATGACTGTTGGAACTCTGACATCTTTCATGTTGTACACTTTGAACGTTGCAATGGCATTCGCATTCTTGTCTTCATTGTACGGTGATTTTATGAAGGCAGTTGGTGCTTCGACCAGAATTTTCGAGCTGTTTGATCGCGATGCTGAAATAAAATCAGGAGACATGACGTTGCAATCCCTGCAAGGAGCTGAACTCAACTTCAATGATGTTTTCTTCCGTTATCCAACACGTCCTGACACCGACGTATTAAAGGGAATCAATTTTTCGTTGAAACCAGGCGAGACTGTTGCGTTAGTTGGACCATCAGGAGGTGGCAAAAGTACAATAATTAGCATGATAGAAAGGTTTTATGATCCAATTCAAGGTTCTATTTCTATTGgaaatctAAGATTGAAAGATGTTAATCTCGATTGGCTAAGATCAAAGATTTCAATCGTAAACCAAGAACCAGTTCTCTTTGCGACCACCATTGCCGATAATATCGCATACGGGAAAGATGCCACAGAGGAGGAGaTCATAGAGGCTGCAAAGCAGGCGAATGCACACAACTTTATATCAACATTCGAGGATGGATACAAGACAACAGTTGGTGAACGAGGCATTAAACTTTCTGGTGGTCAGAAACAGAGAGTAGCGATTGCAAGAGCATTGCTACTCAATCCTGATATTCTTCTTCTAGATGAGGCCACAAGTGCATTGGATGCAGAGAGCGAGCATTTGGTCAAGGAGGCAATAGACAGAGCAATGGTGGGAAGAACTGTCTTGGTCATCGCTCATCGCTTATCAACTGTAAGAAACGCTTCCAAGGTTATTGTTATTGACAAAGGTGGCATTGTGGAGGAGGGCACACACGACGAGTTGATACAAAAAGAAGGGACATACAAGAAGTTGGTTGCTCGTCAATTGAATGCCGGAGAGATGAATGACGGGCTATTCTTAGAAGGGAGCAATGCCAATACACCAAATTTAACACCAAAATTGCCACGAAAAGATGCCAATGAAGAAGATGGAAGCGAAATGCAAGAGAAAGAAGTCCATGTTTGA

Transcript

ENSSJYT00000005179

GGAAACAAGATACCGGCAGATGAAAGTTGTGTAAGGtgatgaaatgaattattaaaaGGTTCAGTTGACGAAGGAAATCGCATGAGGCACAACGTGAAAATAGTTAGCTGATCGTGCACTTGAAAACAGTTCATCGCCTCATTGCCAAAAGAGGAGAACAAAATGCCATCTAGAAGATATCATCAACCATTTTGTAGAATATTGAATCTTATTcgattcattttcttttctgacCTGGTTGTTTCAAGCGCTCTCTGGCTTGCTGGTGGAGATTCACAGTACCTTGAGGACAATGTCACAAAATTCAAGTTGCATCAATCTGTGTTTGACCTGGCATTGATACGATTTTTACTTGctatttcattcattgcatCATACACAGAACTTGAAAGTCTGACCATTCAAACTGCAACAagagatgaaaataatgaaaaaaacaaaaagaaaaagcaaatttaCTCACTGCTTACCTTTCTATTCACAACTGCAAGTCTTGCATACAGCATAgtgaaatgcatttttatcattcaagAACATAAGAACCATCCAGACAACATTCACACCACATACTACGCCTTGGCTATATCATCTGTGGCATTTTCCGGAGTTGAGTTCctcatctttttcatcaacattgCAATGTTGAGAAAGATGGCAATAAAGTACACCAGAATGGAAGAAGATCTTGATAACTTTTCTGGAGAAGAggggaaaaagaaaaaaaccaaagCAGATTTGCGAAGACTTTTTGGTCTGGCAAAACCAgAGACAATGCTCCTTGTTTTTGGAACACTTGGCCTAATTGTCTCAAGTGGATCAAATATGGTGGCACCtttgttttttggaaaagttgTTGATGCAGCATTGAAACCAACAATGAaaCCTTTGAATGAGACAATCTTGATTCTCTTTGGAATTTATGTAGCCGGTGGATTTGCAGCATTTTTCAGAAGCTGGTTTTATACATTGGCTGGGCAAAGACTTGTTGCTAGATTGAGAAAGAAGCTGTTTTCCCATATCATAAACCaagaaattgcattttttgataCAAACAGAACTGGAGAGTTAATGAACCGGTTGTCATCTGATTCTCAAGTCATTCAAAATGCTGTAACAGTGAACATTTCAATGTTGGTTCGCTATTTGCTTCAAATCATTGGTTCATTGGCCATTATGTTTGCTGTCAGCCCTAAATTGACCGGAGTTCTGCTTGCAGTTGTGCCAATAGTTGCAATCGGTGCTCAAAGATACGGTTCCTACGTGAGAGATATGACAAAGAAGTTTCAAGACAAATTAGCCGATGCATCTACTAATGCGGAGGAGTCAATTGGCAACGTTCGGACAGTGAAATCATTCTCGCAGGAGAAGAAGGCATCGAAATTGTATggaaatgatattgaaaatagTTACAATGTTGGAGCGACCCTAGCTCTTGCATCAGGTGCTTGGAATGCAACAATGGCAATTTTCGCTCAGGGTGCGATAGTTTTGGTTTTATGGTACGGTGGTAAACTTGTTCACATTGGTGACATGACTGTTGGAACTCTGACATCTTTCATGTTGTACACTTTGAACGTTGCAATGGCATTCGCATTCTTGTCTTCATTGTACGGTGATTTTATGAAGGCAGTTGGTGCTTCGACCAGAATTTTCGAGCTGTTTGATCGCGATGCTGAAATAAAATCAGGAGACATGACGTTGCAATCCCTGCAAGGAGCTGAACTCAACTTCAATGATGTTTTCTTCCGTTATCCAACACGTCCTGACACCGACGTATTAAAGGGAATCAATTTTTCGTTGAAACCAGGCGAGACTGTTGCGTTAGTTGGACCATCAGGAGGTGGCAAAAGTACAATAATTAGCATGATAGAAAGGTTTTATGATCCAATTCAAGGTTCTATTTCTATTGgaaatctAAGATTGAAAGATGTTAATCTCGATTGGCTAAGATCAAAGATTTCAATCGTAAACCAAGAACCAGTTCTCTTTGCGACCACCATTGCCGATAATATCGCATACGGGAAAGATGCCACAGAGGAGGAGaTCATAGAGGCTGCAAAGCAGGCGAATGCACACAACTTTATATCAACATTCGAGGATGGATACAAGACAACAGTTGGTGAACGAGGCATTAAACTTTCTGGTGGTCAGAAACAGAGAGTAGCGATTGCAAGAGCATTGCTACTCAATCCTGATATTCTTCTTCTAGATGAGGCCACAAGTGCATTGGATGCAGAGAGCGAGCATTTGGTCAAGGAGGCAATAGACAGAGCAATGGTGGGAAGAACTGTCTTGGTCATCGCTCATCGCTTATCAACTGTAAGAAACGCTTCCAAGGTTATTGTTATTGACAAAGGTGGCATTGTGGAGGAGGGCACACACGACGAGTTGATACAAAAAGAAGGGACATACAAGAAGTTGGTTGCTCGTCAATTGAATGCCGGAGAGATGAATGACGGGCTATTCTTAGAAGGGAGCAATGCCAATACACCAAATTTAACACCAAAATTGCCACGAAAAGATGCCAATGAAGAAGATGGAAGCGAAATGCAAGAGAAAGAAGTCCATGTTTGAAAGTATATGGTAATCAAAACCAAAGAGAACTTGCTCTTTGAACTCTTCTAACGATTCTAGaagttttttacttttttcaaagactttaaatAGTAAACAGTTGGCATTGAGCCTTTTAAATCTAAGATATGTAGAACTTAATGTTTCTATTCCCCTGAGGTTTTGTGTCTTAATGCGTTTTACAAGATGGGAACCTCTCGATCTCAACCTTTGAGCCTGAGCCTCAGAGTCTTGTGATTGGAGAGTTTTTAAGTCTTGAGACTTTTGAGCCTCTGTGATTTAGGATGATTTAACCTCTAAGTCAGGGCTAAAAGAGAATTTGCTAAAAGGACGCAAAAGGGTAAAAACCGAAAGAATTTGACTGGTGTACCCTgcagtaaaaataaaaaacttgcaaGATTGTTGTGGGCAATTTATAcgaaaagaacagaaaattcaatacaaaaggtgatctttaaaaaaaacgtAAGTAAGCGGTGGTTTACAAACTTCTTGGGAAATTCTGTAGTTCTCCTGCTGACTACGGGGAAGGGATTGGGCCAATTTGGGAACCTACCCAAGTATCTACACTGTCACGACATGCCATGCTCCTAGTATAGAAAACGTTGGAGCCTCTGAACCTCGAGGTGTATAGATCTTTTAGCCTCTGATTTTTAAGATACATAAGCATTAACTCCAATTATTAGAACCTTATTGTTTAGAATAGCTGACACTTTGAATCTTAGCTCACTGACTGAAaagattaaaacaaaaagtatTATCCCTTTACTAAAATGATTGTATGATTTGCAGGTACTAGAGGCTAATTTATCCTTATTTTTACGTAGTTATCATTTTTCTGTTGTGCTGGACACGcacttttgcattttaaagtAATATagtattaatatttttttagtttctttgcGGTATTTACACACTGATGCAGAGGTTAcgttaacaaaatataatttattataGTTGTTATGTCTATGCATTGTAACCCCACATTAAATTAAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54BU4	ABC transporter B family member 1 OS=Dictyostelium discoideum OX=44689 GN=abcB1 PE=3 SV=1
Q9FNU2	ABC transporter B family member 25 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCB25 PE=2 SV=1
Q0WML0	ABC transporter B family member 27 OS=Arabidopsis thaliana OX=3702 GN=ABCB27 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000672 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00664 all species →	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan
PF00005 all species →	ABC_tran	ABC transporter	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036640 all species →	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR039421 all species →	Family	Type 1 protein exporter	Interproscan
IPR003439 all species →	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017871 all species →	Conserved_site	ABC transporter-like, conserved site	Interproscan
IPR011527 all species →	Domain	ABC transporter type 1, transmembrane domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43394 all species →	ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0015421 all species →	Molecular Function	ABC-type oligopeptide transporter activity	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0140359 all species →	Molecular Function	ABC-type transporter activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000005007.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.