Genomic Location: :...
NR annotation: XP_031560229.1, lysine-specific demethylase 2B-like [Actinia tenebrosa]
| CDS | ||||
| ENSSJYT00000005255 | ||||
| Transcript |
| ENSSJYT00000005255 |
| Protein |
| ENSSJYP00000005079.1 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q640I9 | Lysine-specific demethylase 2B OS=Xenopus laevis OX=8355 GN=kdm2b PE=2 SV=1 | |||
| Q5U263 | Lysine-specific demethylase 2A OS=Xenopus tropicalis OX=8364 GN=kdm2a PE=2 SV=1 | |||
| P59997 | Lysine-specific demethylase 2A OS=Mus musculus OX=10090 GN=Kdm2a PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02008 | zf-CXXC | CXXC zinc finger domain | Domain | Interproscan |
| PF16866 | PHD_4 | PHD-finger | Domain | Interproscan |
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF17811 | JHD | Jumonji helical domain | Domain | Interproscan |
| PF12937 | F-box-like | F-box-like | Domain | Interproscan |
| PF13516 | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR001810 | Domain | F-box domain | Interproscan |
| IPR019786 | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR002857 | Domain | Zinc finger, CXXC-type | Interproscan |
| IPR050690 | Family | JHDM1 Histone Demethylase | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR006553 | Repeat | Leucine-rich repeat, cysteine-containing subtype | Interproscan |
| IPR041070 | Domain | Jumonji, helical domain | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23123 | PHD/F-BOX CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0003712 | Molecular Function | transcription coregulator activity | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0006482 | Biological Process | protein demethylation | Interproscan |
| GO:0032452 | Molecular Function | histone demethylase activity | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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