Detailed information of ENSSJYP00000005131.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: PIK41918.1, hypothetical protein BSL78_21224, partial [Apostichopus japonicus]
Species Catostylus mosaicus · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2
P98156Very low-density lipoprotein receptor OS=Mus musculus OX=10090 GN=Vldlr PE=1 SV=1
P98166Very low-density lipoprotein receptor OS=Rattus norvegicus OX=10116 GN=Vldlr PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001020 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057
all species →
Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172
all species →
RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036055
all species →
Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR050685
all species →
FamilyLow-density lipoprotein receptorInterproscan
IPR023415
all species →
Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270
all species →
LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSSJYP00000005131.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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