Genomic Location: not available for this species
NR annotation: XP_022794394.1, LIM homeobox transcription factor 1-beta-like isoform X4 [Stylophora pistillata]
Species abbreviation CMOSA · all data for this species · gene families
| CDS |
| ENSSJYT00000005411 |
| Transcript |
| ENSSJYT00000005411 |
| Protein |
| ENSSJYP00000005232.1 |
| UniProt accession | Description |
|---|---|
| Q8UVR3 | LIM homeobox transcription factor 1-beta.1 OS=Xenopus laevis OX=8355 GN=lmx1b.1 PE=2 SV=1 |
| P53413 | LIM/homeobox protein LMX-1.2 OS=Gallus gallus OX=9031 GN=LMX1B PE=2 SV=2 |
| Q60564 | LIM homeobox transcription factor 1-beta (Fragment) OS=Mesocricetus auratus OX=10036 GN=LMX1B PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002313 (this species only) |
| Transcription factor family | Homeobox · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00412 all species → | LIM | LIM domain | Domain | Interproscan |
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001781 all species → | Domain | Zinc finger, LIM-type | Interproscan |
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR050453 all species → | Family | LIM/homeobox transcription factors | Interproscan |
| IPR017970 all species → | Conserved_site | Homeobox, conserved site | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24208 all species → | LIM/HOMEOBOX PROTEIN LHX | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0000977 all species → | Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0030182 all species → | Biological Process | neuron differentiation | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
ENSSJYP00000005232.1.
