Gene detail

Detailed information of ENSSJYP00000005378.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: CAH3025459.1, unnamed protein product [Porites evermanni]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P05369	Farnesyl pyrophosphate synthase OS=Rattus norvegicus OX=10116 GN=Fdps PE=2 SV=2
P14324	Farnesyl pyrophosphate synthase OS=Homo sapiens OX=9606 GN=FDPS PE=1 SV=4
Q8WMY2	Farnesyl pyrophosphate synthase OS=Bos taurus OX=9913 GN=FDPS PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004118 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00348 all species →	polyprenyl_synt	Polyprenyl synthetase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033749 all species →	Conserved_site	Polyprenyl synthetase, conserved site	Interproscan
IPR008949 all species →	Homologous_superfamily	Isoprenoid synthase domain superfamily	Interproscan
IPR039702 all species →	Family	Farnesyl pyrophosphate synthase-like	Interproscan
IPR000092 all species →	Family	Polyprenyl synthetase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11525 all species →	FARNESYL-PYROPHOSPHATE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004161 all species →	Molecular Function	dimethylallyltranstransferase activity	Interproscan
GO:0004337 all species →	Molecular Function	geranyltranstransferase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008299 all species →	Biological Process	isoprenoid biosynthetic process	Interproscan
GO:0016765 all species →	Molecular Function	transferase activity, transferring alkyl or aryl (other than methyl) groups	Interproscan
GO:0045337 all species →	Biological Process	farnesyl diphosphate biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00787	FDPS; farnesyl diphosphate synthase	EC:2.5.1.1 EC:2.5.1.10	Prenyltransferases	ko01006	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.