Gene detail

Detailed information of ENSSJYP00000005461.1 in Catostylus mosaicus

Genomic Location: :...
NR annotation: XP_012555704.1, ARF GTPase-activating protein GIT1 isoform X3 [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSSJYT00000005644

GATGATAAATATCATTGTGGTTTCTTCTATAACAATTCTCATTCTCTTTCGCTATTCTTATCATAGATGCTCATGTTTGTACAAACGTCTATTTTATCACTACGCAAGATGAAAATTCGAATATCGGGATTAAGGTGTTGTGTTCCATGTGATTTCAcgatttgttttttgcaaggattttccACCAGCTTTGTTTTGCTATAGCTCAAGACACGACTTAGGCCAAGCAGTTCAAGTTTATAGAGAGCCGTTgatattttgaacaaaacgAAACATTTTGTATAATATTGGAGATCGAGATGGAAAGGAAACAACTTGCTGTTAAACCGATAATTGACAAAGATACGTTAATTGCAACACGCTCGAACTTAAAAACCTGTGCTGATAGAAAGTTGGTCAATGGAGATTTATTAGGACCGAGAGTTTTCAGATTTTATCGGCCTGGTAGTACTTCATCAGATGTGACTGATGGTCAGTATGTCAGCCTTGAAGAATATAATGGActtaaaaagcaattgaatGATGCAGAGgAGAGAGCCAATCACCTGCAAAAGGCAAATACTACATTGAACCAAGAAGTGAACCTCCTTCGTAGCATGgTACAGAAACTGATGCAAGAGAATGCGTCTTTGCGAGCACAAGTTAGCCAAGCAGATGCCGGTCGTGCCGATGCCGAGAAGCAACTCATTGAAATGCAGTCACGGTTTAACGAGATGCTGATGATGCCAAAGGTAGATGATTCTGATTCAGATCATGTACCGATACAAACAATTTCACCGCATCCGGGACCAGGAAGGtcagaaatattttttgaaggtTCTTACGATAACGTAAACTTTGGTGCATCACTGGATTACTCAAAACCTGTCAAAACAGAGCCCATGTCAACGACCACTCACTCAACGCTATCAAGTACCACGTCTCAGCAATCAAATGGCCAACTGCAAAGCCCTCACGAATCATCGGAAGATTCCACAGCATTTGTTACAGAAGATGAAACTCCACAATCGCCGCGAGCTGATGAAGAGCTTCCTACACAAGAATTGATTGTTAAAGCCACCGAACAAATCACAAAGAAAATACAAGAATTATTGTTAGCAGCGCAAGGTAGCCGGCATAGTAGATACATACCATGTGCCAGTAACATATCAACTGCAGTTAATGACATGGCGAATCTATTTCCAAAGCATCCAAAAGCAGAGAATGTTCGAGGTGCTTTGCGGTTGATGATAACAAGCGCAGCAAGATTACAAGTTGAATGCAGAAGTAGCGTGTTGCCTGATCGTACAATCGATGCCGCAATGTTGACGCAACAGGTTATTCAATGTGCTTACGATATTGCCAAAGCTGCTAAACAACTAGTTATGATTTATAATCAAGATTAGTTTAATAGATTAGGAAGATAGAAGTAGTAGCTATAATATACTTTTGTAAAATACTACAAATTTGTGGCTTCGTCCGGTGACGTGATTTGAAAGGAAGGATAGCTGGGTAATGGATATCAATGTGAGTGGTTGGGAATTTTGCAGTATTCTCGCATAATGCTACGAGATCTAATGTTTCTTCCTCGCTTTAATGTCTTCTTCATTTCTTACCCCCAAAACGCGTTTTTCCTGCTGTTGCCAGTACCAGTACTGCACACTAATTAGGGACATCCTAGAGCATTTCAGAATCATGTAACAGGTATTTTACCAATCCCTCCATTATACGCATCAGACCACTGGAAGACATGCGAATTTAAACAGTTGTCTCTCACATCTATACTTTGTAGCTGCCCTTTTCTCATCGTTGAGTATTTGCATCTTGTCAAGAGTCAAGCAAACATGGTAACCTTTCGCCCAACAAAGTCACCCGAGAGAGTAAGCCTTCCTCACAAAACGATAGAAAAGGGGCATGGCCTGTGTGGGTCAaagatttttatctttttttgccAGTCACTGACCTTGCGACTGTTATAATCCCCGATTCTTCGTTTGGCTAGTGATGGTTCTGTATTAAAATTTCGAAGTTTATCTACTGATCCGAATGGTGGTAGTGTTGCCTATATACCCAAATGGGGTCCTACAATCAGGGGCGTCTTGGATAGGGACTCATACGGGGCacaattcaataattttccGACGAGGGA

Protein

Uniprot

Uniprot term	Description
Q66H91	ARF GTPase-activating protein GIT2 OS=Rattus norvegicus OX=10116 GN=Git2 PE=1 SV=1
Q14161	ARF GTPase-activating protein GIT2 OS=Homo sapiens OX=9606 GN=GIT2 PE=1 SV=2
Q9JLQ2	ARF GTPase-activating protein GIT2 OS=Mus musculus OX=10090 GN=Git2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16559	GIT_CC	GIT coiled-coil Rho guanine nucleotide exchange factor	Coiled-coil	Interproscan
PF12205	GIT1_C	G protein-coupled receptor kinase-interacting protein 1 C term	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR047161	Family	ARF GTPase-activating protein Git-like	Interproscan
IPR032352	Domain	Arf GTPase-activating protein GIT1/2, coiled-coil domain	Interproscan
IPR022018	Domain	ARF GTPase-activating protein GIT1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46097	G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0007420	Biological Process	brain development	Interproscan
GO:0008277	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan
GO:0031267	Molecular Function	small GTPase binding	Interproscan
GO:0032012	Biological Process	regulation of ARF protein signal transduction	Interproscan