Gene detail

Detailed information of ENSSJYP00000005596.1 in Catostylus mosaicus

Genomic Location: chr18:6001183...6029985
NR annotation: XP_047138894.1, lipoxygenase homology domain-containing protein 1 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSSJYT00000005786

ATGCACAGTTCAAAAGGTGTGAGTGATTCGTTAAAAGACAGTTATTTATTAGACCGACCAGCAAGACCAAAAACAGCAATTGGGAATGGAAGGAAAGGAATAAGTGGAATAAAACGACCATCAAcTGGGACAACATGGAAAAACCCAAATGCTCATCCAACAAAAAGTACCAAAAAATTCACCGTTAGTTTGAATCATTCTTCATTTGAATCTGGCGTGAGCAAAAGAGCCCCTTTTGCACCAAGATCATTTCTTGGACAGAGTTCTTATGACATGCCTAAAGTTGTGAATGGAAAAACGTACTCAATGAAAGAATATAATCCTCTAGAGGATCCTCATTTATCGGATTACTATGCAAGAAAACTTGGAATGTTGCCTGCTGGTACAACATATCTTGTAAGTGTAATTACTGGAAGCAAGAAAGGACAAGGCACTAATGCCAGGgttttcattcaaatacGAGGCACAAAAGGGAAGCTTTCAAATCAACATTTAACGAACAGAAGTCACCCAGATGCCATTGCGGCTCTGAATGGTGAGGAATCGCCATTCAAGTTTGCACCAGGAAGCACGGAAAATTTTACCATCAAAGGGCCTGATGTTGCCGAACTTATTGCATTAGAAGTTGAGCATGATGGATTGGAACGGAAGCAATCTTGGTTTCTGGAAGAAATCAGAATAACCAATCAGAGAAGCAACAAAACATACGTATTTCCATGTCATGCATGGTTATCGCTTTACGATGGTGACTGCCAagttaaaagaattttgaaaccaGCTGCTGCGGGAACAGCTGAGAGGATAATCTATGAAGTCCAAGTTATAACTGGTGACAAACGCGGTGCTGGCACGGACGCACATGTTTTTGTGACAATTTTTGGTGACCACGGACAAACCCCAAGGGTACAACTTATCAATAGGAGTGTAGACACTTTTGAAAGAGGAAAAacagatattttcaaaatcaagacAAAATCTCTTGGAAAGCTACAAAAATTAACCATTGAACATGACAATGCTGGTTTTGCACCAGGCTGGTATCTGGACAAAAATCTAAACAACACCAAAGAAGTGTATTATTTTCCCTGTTCCAATTGGCTTTCAAAAGACGAGGGGGATGGACAAATCGCTCGACAACTTTTAGGAACAAGAAATGTGGATAATGTTGCTCAAGcccataaatacaaaattaaaacacaCACTGGTGACGTCAGAGGCGCTGGCACCGATGCAAATGTTCATATAACCATATTTGGTGATGGGGGCGACACGGGGCAACATAAATTGAGTAATAAGTGGAAAAATAACTTCCAAAGAAAAAGtgTGGATACATTTAATATTGACACCCCATCCGTTGGGAATTTGAAAAGAGTTCGAATCGGTCACGATAACAAGGGTTTGGCTGCTGGATGGTTCCTTGACAagGTTGTTGTTGAAGATGGGGAAGGAAAAACATTCGAATTTCCATGTAACCGATGGCTTTCAAAAACTGAAGATGATGGGAAAATTTCGAGAGATTTGATTTTAGCTGGAAGCTCCGATATTCATGGATCAACTGGCATACCCTACCACGTTCACGTGACCACTGGTGACGTCAGAGGGGCTGGCACTGATGCGAATGTTTTCGTGATTTTCTTCGGCGGAGAAAACGGAGAAACGAACAGTGGAAAGTTGTTCCTTGAAGATGACAGCaagaataattttgaaagagGAAAAACCGATGTATTTACTGTGGAATGCACGGAGCAGTTCAGCCCTTTACATCATCTTCGCATAGGCCATGATAATTCGGGCCCTGCTTCTGGATGGTATCTTGAAAAAGTGAATAGTCCAAGTACTGGCATTGTTCAGACATTTTTTTGTCGCAAATGGCTTGCAGATGACGAAGGAGACAGGCTCACTGAAAGGGATCTAATTGAAGATCTCGACTGGAGGCAGCAAAGAGAAATAAAGGAAATCTGGAATGTAATTGTTTACACAAGTGACATCAGGGGTGCAGGAACAGACGCCAATGTGATGATGGTTTTGTATGGAAGCGACGGGAAAACGGAGGAGATCACTTTGAATAACGAAACAAATAACTTCGAAAGAGGAAGCATCgataaatttaaaatggaaGTTAAAGATATTGGTACTCCTTATAAAATAAGAATTAGGCATGATAACTCGAAGCCTTTTTCAGACTGGCATTTAGACAAGgttGAGGTGGAAAGCGTGACTCGTGGTGGGTTTTACACCTTTAATTGTGGAAGATGGCTGGCAACAGGTGAAGATGATGGTGAAATTATGAGAGAACTTGCAGCTGAAGGAGATGGTATAAAACCAGCTCCAgCATTGAAATATCCTGTCTCTGTTTTAACTGGCAACAAACGAGGGGCTGGCacaaatgcaaatgttttcattaatataTTTGGCGAATTTGGTGACACTGGTCCAAGGTCCCTCAAAAAGTCACAAAACAGGAACAAGTTTGAAAGGAGCCAGgctgatgattttgaaattgatgcaATACGATTAGgtgatttgaaaatgattcgAATCGGACATGATGAGTCTGGCATGGGTGATGCTTGGTTTTTGGATAAAGTTATCATCAAAGATCCCGAGAAGAGCGACAACCAGTTCACATTCCTTTGTAACAGatggTTAGCaactgatgaagatgatggaaAAACAATTAGAGAATTGCCAGTTGGTGAACATGGGACACTTCtaaaaaCAACGTCTTACCGCGTGTCCGTGAAAACAGGCGATGTCCGGGGTGCTGGAACGGACGCCAATgcttatataaaaatatttggtaGTGAAGGTGATACTGGGAAGATATCATTGAAACAATCCGAAAAtaccaaaaacaaatttgaaaggGGAAGAGTTGATCAATTTACTGTTGAAGCAATGGATATAGGCGAGGTTAGCAAAATCTTAATTGGCCATGATGGAGCAGGAATTGGTGCTGGTTGGTACATAGATTCAGTGGCAGTAGATATCGAGTCTCTTGGGAAACATCTCGTCTTTCCTTGTCACAAATGGCTGGCGACTGATGAAGATGACGGGAAAATAGAAAGAGAGCTATTCCCAGTTGAAGAGAGAACTGTTGAAAAAAAAATTCCTTTTGAAATCGAAGTACATACAAGTGACATACGAGGGGCTGGTACAAAtgccaatgtttttattgttctttaCGGTGACAAAGGAAAATCGGACGAATTTTGGCTCAGGAATAAAACAGACAATTTTGAAAGAGCACAGGTCGATAAATTCAAGGTTGAAAGTGATGAAATTGGAGCCATTTCGAAAATTCGAGTAGGCCACGATGATTCTGGTTTTGGAGCTGCCTGGCATTTAGAAAAAATAATTATTCGGAGGTTAGAGGGAGAATCAagcaaaaagaagaagaaaaagaagaagaaaaaagaatcgAAAGAAAGCGTAGAAgaatttgatgatgaagatgaatgcAATTACATGTTCGTTGTAAATCGATggtttgctaaaaatgaagatgatggaGAAATTGTTCGTGAACTTGTACCAACAGATTCTTCAGGGAATCGAACTCGAACGACACCCTACACCATTCGAGTTGGTACTGGTGACGTTCGAAGTGCTGGTACAAATGCAAATGTGTTTTTGACCCTCTATGGTGACAATGGTGACTCTGGTGAAAGGAAACTTGCCAAATCTGAGACACATATGGATAAATTCGAGCGGAATCAGGAAGATGTCTTTAAAATGGAATTTGTTTCCTTGGGGAAACTTACAAAAGCAAAGATCCGACATGATAATTCCGGACTCAAATCTTCTTGGTTCTTGGAGCGGATTGAAGTTGTTGACGAAAAGgagggaaccagctacttcTTCCCATGCTCTCGATGGCTTTCAACAAGTGAAGATGATGGACAGATATGTCGTGAACTCGTACCCGTTGATAAAAGCgattttgaaagaagaaaaagccGACGAATGTCGCGAAGTGGAAGCAAAATGTCTCTAAATCAAGGTGATGCTGTAGATCTTGAACAGAAAGCTGCCATGACAACATACGAAGTCAGTGTAACTACTGGTGATGTCAAAGGTGCTGGTACAGATGCGAATGTTTATTTAACTCTGTATGGGGAAACGTCTGATACAGGgaaaattcaattgaaaacgTCGAAGAcatataaagataaatttgAACGAAATCAAACGGATATTTTTCAAGTTGAAGCAGTTGATATCGGATCCCTTAAGAAAATCAGAATCGGCCATGACAACAAAGGTGGTTTCGCAGGCTGGTATCTTGATAACGTCATTATCGATGCTCCGTCTCTGGGGAAAAAATGGGTATTCCCTTCCGGTAGATGGCTTGACAAAGGGAAAGATGACGGTAAAACTGAAGTCGAATTATTCCCAAGCGATGAACAAGAAGAGAATTACATTCCTCATGTACCGTATGAGATAACTGTTTACACAAGTGACAAATCAAATTCTGGAACCGATGCAAATGTATTCATAGCGTTGTACGGAATGGGAGGGGCTAGCACAGAGCAAGTTGAattgacagaatcaaagaagaaaaaacgaAAAGAATGTTTTAACAAAGGATCAGTTGATGTGTTTGTAAGAGAGCTTGATGACATTGGAGAAGTTATTGAAAAGATAAGAATTGGACATGACAATAAAGGCTTTATGGCTGGATGGCATCTTGCTAAGGTTGAAATCCGAAGATTGAATACAGATGGTTCAGGATCGACCACATTCACATTTCCTTGTAATCGCTGGCTTTCAAAAAGCGAAGATGATGGAATGATTGTAAGAGAACTTGTTCCTGCGAAAATTGTGGAAGAGACGATTGGTGAAAAAGGAACAATTGAAGCGGAAGAGAAAAGAGTTGATGCACTGACTATGCATACCTACGAAGTCCATGTCTACACAGGTGATGTAAAGAGCGCTGGAACTGATGCCAATGTGTTTTTAACCATGTTTGGCGAAAATGGTGACACAGGTGAACGAGCTCTTTCGAAGAGTGAAACACATCGAGACAAATTCGAAAGAGGACAGGAGGACATATTTGTGATGGAGGCTGTTGACCTCGGTTACATTTACAAAGTTTTAATTCGCCATGACAACGCAATGATGAGTCCATCTTGGTTCCTTGACCATCTTGAAGTGATAGACAAGAGTGACAATGGCCGGcgttttgtgtttttatgcGAAAGATGGCTGTCAAAGagcaaagatgataaaaaaatcaaacgaAATCTTTACGAGAAATCTTACGAGGGTGATCGTACCTCACTTGCATCCACTGCCACGTCATTCCGAGGCAGCACGTTTAGTTTGAGCACTGACAGTCTCGCTGCTTCAAGTATGTCATCACCCCTCAAAGGCAACAGGAGTCCGACAATGTCCCGAAAAGGTTCTATATCGGACAAAAGCAGACGCAGTTCAGCCGCTGACAAGATATTCAAGGATGAGTTTGAATCGAGTTTGAAAAAACGTAGGAAAACAATTCCATACACAGTTCGTGTTGTCACTGGTagcaatgatgatgaaggtacAACCGCCAATGTCTTTGTTGTGTTCATTGGCACTGAAGCTGTTTCTGAAAAGATTCCTTTGGAATTGATTGGCAAAGATGGTTTCACTGCAAAATCGGTTGAGACTTTCTCTGTAGAAGCACCTGACTGTggagaaataaagaaaatcgaGGTAGGACATGACGGTTATCGTCCGCAAGATTCCTGGTTCTTAGACGaggttgttgttgatgttccAACGACAGGAAAGAAGTACACATTTGCTTGTAAATGTTGGCTTGGAAAGGACAAAGTGGACGGGAAAACATCGCGGATATTCTCAGTAGGAGACGATCAGACTATTACATACAAACCAAaaattccACACGAGATTACAGTTTACACAGGTGACACATCATCAGCTGGCACAGACAGTCAAATTTCTGTCACTTTTTTTGGAACAGACGGAACATCATCTGAAATCAAACTCGACAAAGGGGAGGACAGATTTGAACGAGCTTCTATTGACATAATCAAACTAGAAATTGATGATATTGGAAACCCAACAAAAATCAGAATAGGCCATGATGGAAATGGAAGTAGGCCGGCATGGTATCTAGAAAGGATATTGATGAGAAATTTGTTGTCTGATAAAGTCGCTGTTTTCAAATCCAACCAATGGTTTTCAAAATCCCATGAGGATGGTCTACTTGTCAGAGAAATCCCAGCTGAGATTGAGggaaagaaaatcattgaagAAACAACATACAAGATCAATGTACACACTGCAGATGTTCGAAGTGCTGGTACCGAtgcaaatgtatttttgaaaatttacggAGATAAAGGTGATTCTGGTGAGCTGCAATTAAAGAATTCTGAAACTCATCGTGACAAATTTGAAAGAGGTCAAACTGATATATTCACATTTAAAATGTTGAGTTTGGGCCAACTTCTGAAGATTCGAATATGGCATGACAACAAATTCCTTCGCTCCGGATGGTTTTTAAGACAAGTCGACATCGAAGATGTTAACGAGAGCAAAACATATGAGTTTCAGTGCAATCGTTGGCTTGCAAAAGACGAGGATGATGGGAGTCTTGTCAGGGAATTACCATGCTCAAATAAGGAGTCGGATGGAGATTCCCCATCCAAAGCTGTCAAAGCGTTCGAAGTTACCTTCCTCACCTCGGACAAGCAAAGTGCTGGTACGAACCATAACTGTTGGTTGATTTTTATCGACGAGGCTGGAAATCGTTCGAAAGAAATTCTCATCGAAAATAAACCGAAACAAAAGTTGTTTAGCAGGGGTGAAACGAACACCGTTAAAGTTGTCTCAGCCCCGCTTGATACGTTGAAGACACTCGTTGTAGGACATCGGTACAGAAAGGGTGCCACCTTAAAAAAGAGCACAGACGATGAAAGATGGCATTTACATGAAGTTATTGTGAAGGACTTAGATACAGAGGATAAGTATACTTTCGCATGTAAGCAATGGATCGAGCCATCGCAAGGAAAAGAAGGGGCGGTCAAACTTCAATGTACCTCCACAGAAAAGTCGAAGCTACGAAAAAATCTGAAACCAGTGCAGTATGAGATTAAAGTACACACTGGTGATGTTTCTGGTGCTGGAACAGATGCCAATGTGTTTATTAATCTCTTTGGTGAATATGGGGACACAGGAAAGAGACAGCTATCGAAGAAATTTAAAGACCTCTTCGAACGAAACCAAGTCGACGACTTCAAAATCGAAGCATTGGACTTAGGCCAGCTTACAAAGTTGCACATTGAACATGACAATAAAGGTTTTGGAGCAGGATGGTTTCTCGATAAAGTTGTCGTCACTAACTTGTCAGATAACTCGACAACCGAATTTCCATGTTCACAATGGCTGGACAAGAAGAAAGGCGATAAACTTATTTCTAGAGACCTTTTGCCAGTGAATTAG

Transcript

ENSSJYT00000005786

Protein

ENSSJYP00000005596.1

MHSSKGVSDSLKDSYLLDRPARPKTAIGNGRKGISGIKRPSTGTTWKNPNAHPTKSTKKFTVSLNHSSFESGVSKRAPFAPRSFLGQSSYDMPKVVNGKTYSMKEYNPLEDPHLSDYYARKLGMLPAGTTYLVSVITGSKKGQGTNARVFIQIRGTKGKLSNQHLTNRSHPDAIAALNGEESPFKFAPGSTENFTIKGPDVAELIALEVEHDGLERKQSWFLEEIRITNQRSNKTYVFPCHAWLSLYDGDCQVKRILKPAAAGTAERIIYEVQVITGDKRGAGTDAHVFVTIFGDHGQTPRVQLINRSVDTFERGKTDIFKIKTKSLGKLQKLTIEHDNAGFAPGWYLDKNLNNTKEVYYFPCSNWLSKDEGDGQIARQLLGTRNVDNVAQAHKYKIKTHTGDVRGAGTDANVHITIFGDGGDTGQHKLSNKWKNNFQRKSVDTFNIDTPSVGNLKRVRIGHDNKGLAAGWFLDKVVVEDGEGKTFEFPCNRWLSKTEDDGKISRDLILAGSSDIHGSTGIPYHVHVTTGDVRGAGTDANVFVIFFGGENGETNSGKLFLEDDSKNNFERGKTDVFTVECTEQFSPLHHLRIGHDNSGPASGWYLEKVNSPSTGIVQTFFCRKWLADDEGDRLTERDLIEDLDWRQQREIKEIWNVIVYTSDIRGAGTDANVMMVLYGSDGKTEEITLNNETNNFERGSIDKFKMEVKDIGTPYKIRIRHDNSKPFSDWHLDKVEVESVTRGGFYTFNCGRWLATGEDDGEIMRELAAEGDGIKPAPALKYPVSVLTGNKRGAGTNANVFINIFGEFGDTGPRSLKKSQNRNKFERSQADDFEIDAIRLGDLKMIRIGHDESGMGDAWFLDKVIIKDPEKSDNQFTFLCNRWLATDEDDGKTIRELPVGEHGTLLKTTSYRVSVKTGDVRGAGTDANAYIKIFGSEGDTGKISLKQSENTKNKFERGRVDQFTVEAMDIGEVSKILIGHDGAGIGAGWYIDSVAVDIESLGKHLVFPCHKWLATDEDDGKIERELFPVEERTVEKKIPFEIEVHTSDIRGAGTNANVFIVLYGDKGKSDEFWLRNKTDNFERAQVDKFKVESDEIGAISKIRVGHDDSGFGAAWHLEKIIIRRLEGESSKKKKKKKKKKESKESVEEFDDEDECNYMFVVNRWFAKNEDDGEIVRELVPTDSSGNRTRTTPYTIRVGTGDVRSAGTNANVFLTLYGDNGDSGERKLAKSETHMDKFERNQEDVFKMEFVSLGKLTKAKIRHDNSGLKSSWFLERIEVVDEKEGTSYFFPCSRWLSTSEDDGQICRELVPVDKSDFERRKSRRMSRSGSKMSLNQGDAVDLEQKAAMTTYEVSVTTGDVKGAGTDANVYLTLYGETSDTGKIQLKTSKTYKDKFERNQTDIFQVEAVDIGSLKKIRIGHDNKGGFAGWYLDNVIIDAPSLGKKWVFPSGRWLDKGKDDGKTEVELFPSDEQEENYIPHVPYEITVYTSDKSNSGTDANVFIALYGMGGASTEQVELTESKKKKRKECFNKGSVDVFVRELDDIGEVIEKIRIGHDNKGFMAGWHLAKVEIRRLNTDGSGSTTFTFPCNRWLSKSEDDGMIVRELVPAKIVEETIGEKGTIEAEEKRVDALTMHTYEVHVYTGDVKSAGTDANVFLTMFGENGDTGERALSKSETHRDKFERGQEDIFVMEAVDLGYIYKVLIRHDNAMMSPSWFLDHLEVIDKSDNGRRFVFLCERWLSKSKDDKKIKRNLYEKSYEGDRTSLASTATSFRGSTFSLSTDSLAASSMSSPLKGNRSPTMSRKGSISDKSRRSSAADKIFKDEFESSLKKRRKTIPYTVRVVTGSNDDEGTTANVFVVFIGTEAVSEKIPLELIGKDGFTAKSVETFSVEAPDCGEIKKIEVGHDGYRPQDSWFLDEVVVDVPTTGKKYTFACKCWLGKDKVDGKTSRIFSVGDDQTITYKPKIPHEITVYTGDTSSAGTDSQISVTFFGTDGTSSEIKLDKGEDRFERASIDIIKLEIDDIGNPTKIRIGHDGNGSRPAWYLERILMRNLLSDKVAVFKSNQWFSKSHEDGLLVREIPAEIEGKKIIEETTYKINVHTADVRSAGTDANVFLKIYGDKGDSGELQLKNSETHRDKFERGQTDIFTFKMLSLGQLLKIRIWHDNKFLRSGWFLRQVDIEDVNESKTYEFQCNRWLAKDEDDGSLVRELPCSNKESDGDSPSKAVKAFEVTFLTSDKQSAGTNHNCWLIFIDEAGNRSKEILIENKPKQKLFSRGETNTVKVVSAPLDTLKTLVVGHRYRKGATLKKSTDDERWHLHEVIVKDLDTEDKYTFACKQWIEPSQGKEGAVKLQCTSTEKSKLRKNLKPVQYEIKVHTGDVSGAGTDANVFINLFGEYGDTGKRQLSKKFKDLFERNQVDDFKIEALDLGQLTKLHIEHDNKGFGAGWFLDKVVVTNLSDNSTTEFPCSQWLDKKKGDKLISRDLLPVN

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IVV2	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4
C8YR32	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1
Q7Z442	Polycystin-1-like protein 2 OS=Homo sapiens OX=9606 GN=PKD1L2 PE=1 SV=5

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001307 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01477 all species →	PLAT	PLAT/LH2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001024 all species →	Domain	PLAT/LH2 domain	Interproscan
IPR052970 all species →	Family	Inner ear hair cell lipoxygenase homology domain-containing protein	Interproscan
IPR036392 all species →	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45901 all species →	PROTEIN CBG12474	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24822	LOXHD1; lipoxygenase homology domain-containing protein 1	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.