Gene detail

Detailed information of ENSSJYP00000005685.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_028392577.1, WD repeat-containing protein 88-like [Dendronephthya gigantea]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000005887

GGAAAATTCAAGATGGAACCGAATCCTGGTAATGATGCCACCTGAATATGAAAGCAAATACACGTGCCCCAGATActgcaattaaaacaaatacaGAGAGAATGCTGCCCGTCACGAAAGCGTCATGGGAACACGAAGAATTGGCGAAGGTACAGTTTCTTGTGTTTCGTGGCCATCTGAAAGGAGTCAATTCCTGTTGCTTTATGGATAATGACAACATGATTGTTAGTGGTTCAGATGATCAAACCATAAAGCTCTGGCACCTCAAAAGACAAGAGAGTGTTGGGAGCTTGTCTGGACAtaagaataaaattacatgCTGCAGGGTATCATTCGATTCTAGAAGAATAGCTTCTACAAGTTGGGATAATTCAGTAATTGTATGGGATACTGTGACTGGCAAGCAATTGTGGAATGGGGAACACGATGGTATTGTCACTACATGTGATTTTTCTTATGATGGGAAATATCTTGTTACTGGAAATGATTTGGAAAACTGTGTAAGGATTTGGGACGCATACGATGGGCAACTgattaaattaatgaaatATCATAAGAACACTGTCACATGTTGCCGGTTTTCTCCAATGTGTTATCGGTTTTGCAGTACCTCTGTAGATAAAACAACCCATATAATTGACATGCAAAATTATAGAGATGATATAAGTCCGCATGGAGTTCTTCGAGTAGGTGGTCATAATAATGTGGTATCGACAGCTTGTTTCTCTGGTGACGACAGGCGTCTTTGTACTGGTTCATGGGACAAAAACCTACAAATGTGGGACGTAAATGCTGGTGGTTACCGGAAAGAAGGACCGtttacattgaaaaatggACACGAAGGCTCAATTACATCGTGCAAATTTAGCAATGACgGGTCAGTCTTAGTCTCATCTTCGTGTGATCAAACCGTCACTGTCTGGGATGCAGATCTGGGCTTCAAAAAGCTTTCACTTCAGGGTCACCAGGACTGGGTTAATGATTGTGACATAAGCAAAGACAAAAGGATCGTTTTGTCATGCTCACGgGATCGCACAATACGTGTGTGGAATATTGAAAGAAGTGAAGATATCCCTGTCGTATTACAAAATAAGCTCAGTATTGGGCtgcaaatgttgcagTGCCAAAAATGTGGgaaacttttttcaatttcaaaagctCAAGATCCGGACTCTTTCAAATATTGCGTATTCTGTCGCTTGCAAGAGCCAGTCAGACCATTTTCATCAGAAGAATTCTTAGAAGAAGTTTCTTTAGCTTTGGTTGAAAGAACATGAAGTAAGTGGAAAACCTGTACAGCATGTTGTCTTTAACACACGTGTACTGATCGACGAAATACAGCATATTATAGAACTATTTGCCAATCATTTAGGGGACTGGACTTCACAGGTTtcttttaatgtgatattttcCTGATATTGAGCCATGTTGGAGTGCCGTCTTTGGCATACAGAATGGTATTTTTTCGCATAAGAATTTTTGACTGATCATCatgttcatcatcattactgTCATGAACATAATAAATCtttaattacaatgataataaGATAGAATGAAGTTCCTTAATGACAACAGCAATGAAAAAGTCTTGCATCTTTGAACATCTAAATCGACAGCTAAGAGCTTCTCATGCCTAGGTTTGACAGTAAGACGGTATATGCAGTGCATAACCCAAATCATACCCTAACTATCCCACATAACAAATCTCGCCGTTGAGGCAATAGGAGCAGAATTTTTCCAGAAATTCAACGCTTGGCACTCTTTATTCATGCTATTAATGATTCCATGTCACATTAAGCAGTGCTTGAAAATAAGAGCAGCAATCTAAATTGATAAACTTCACGACGTACACGTATTCTACCATTATAATTTAAGTTTTTGCACAATTTCATGATTACGTACATTGCAATGCTTTGATGCGattaaaaagtttcatttctcATGTCATATCTAGGCAATGTCTGTCTATTAATTTGGAGCTAAATTAAAAGCTGCAAACTGACTGTTTAGATACACGTGCTGTTTTACACGTGATTCTTTTACAAATGGTAGATCCACCATGCTCTGTAATTGATGTGATAAGTGATTGTGATTGTGATTTGTGATTTGTGATTTGTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZMY6	WD repeat-containing protein 88 OS=Homo sapiens OX=9606 GN=WDR88 PE=1 SV=2
Q9FUY2	Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 SV=2
P40968	Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006116 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45048 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24757	WDR88; WD repeat-containing protein 88	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.