Gene detail

Detailed information of ENSSJYP00000006094.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_002161785.2, RNA polymerase II subunit A C-terminal domain phosphatase [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

ENSSJYT00000006349

ATGGCGTCTTTGCGTAAGGTTGCCATCTCAGGGAAGTCTACTGTTAAGATATTAAAATGGCATGTGAAGCAAGGTCAAGAGGTGGAGAAAAATGCAGTGCTCGCAAGCTATGTATACAGCGGTGAGCTTAGTCCTAATACTGTCAACACAGAGAGAAAACTGAAGTCAAGGTTCCAGGGAAAAGTTACCAAGATCCTTGCTAAACAAGATGAAGAAGTGCCTCCTAGGTttgAACCAGTGATTATTATAAATGAAGACCATTGTATGCACACAATTATCATGAAAGATATGTGTTGCCAATGTGGTGAAGATTTGAGAAGggACATAAAGATCCCAGGGCAGTTGTCAGAGCCTGTGGCTGCAGAGATACCAATGGTTCATAATATACCTGAACTAAGAGTTAGTGTTGAGGAAGCTGAAAGGATTGCACGCTATGATGAACGCCAGCTTcttaaatcaagaaaattagCATTAGTTGTTGATTTAGATCAGACACTGATACATACAACCCATGAAGCTGTACCACATGATTTACCTGATGTTTTCCATTACAAACTGCCTGATCATCCTTTTGAATACCATACTAAACTGAGGCCTGGTGCGAAAACCTTCCTACAAACTGTGGCTAAATTCTATGAATTACACATCTTTACAATGGGTTCAAGAATGTATGCTCACACCATAGCGAGACATTTGGACCCGGACGAAAAGCTCTTTGCGCACAGAATTAGATCCAGGGATGAGTGCTTAGATGGTTTCAGCAAATCACGAGACTTGAGAGCATTGTTTCCTTGTGGTGACCACATGGTATGCATCATAGACGACCGAGAAGATATATGGGATCTTGCACCCAATCTAATCACCGTTAAACCTTATCGATTTTTCAAGGGCACCGGGGATATCAATGATCCTTTTGGAAATACAGAAAACCCAAACCCTGCTGATGTTTCTGATGAAGGAGAGGACAATAAAGAGAAGGGTGAAGCCGTGGTTGACAAGTCTGATGAAAAAGACGAAGGAAAAGAGAACGTTATAACTGGCAAAGATGAGGAAGGAAATGGTTCAAAAGTAAAAGTGGAAAATGAGGCTTCTTCGGAGAATCATAGAAAAGTGAAGGAGGGTGAAGGAAATGGattaaatgagaaaaaggAAGAGGCAGATTCAGCGAAAGAAGGTAATGAAGATTCGACCATGatcaattcttttttgatattaatttcatgtattGTCTTCTCAGGTGCCGATCATCCTCCTGATTTGGACGATTATCTTTTCTACCTTGAAGAAATTCTTGAACGAGTTCATGGCTCTTTTTATTCAACCTTAGATGCTATCAAGGCGAAGGGTGGTCTCGCCCGTCAAGATCCAGACATTTCTCGATTCTGCACTCCAGGCACCGTCAGCCCAGATGCGCGAGCTATTATTCCTTCTCTAAAGCAGCAAGTTCTCAAAGGATCAAATTTAGTTTTCACAGGTGTAATTCCAACTAATGTCCTGTTAAAGAACAGCACTGTTTATCGAACTGCTATAAGCCTTGGAGCAATTGTTACCGATAATATTGTAAGCAGTAAAAACCATGACGTCGACAAGTCCCTTTACACGACGCATGTTGTCGCTGCTAGGCTCGGAACTGAAAAGGCTTACCGTGCAAGCAGAATTCGAAACGTTAAACTTGTGGGGGTAGACTGGCTCTGGTGTTGTGCGCAAAGATGGGAATGGGTAGATGAGAGATTGTTCCCTGTTTCGAGTCATCCTCCGGATAATGGAGCTGGCACGCCTGAAGTGTCGAGCAGGGGAACTCCGGTTCCAAGGGAGAGGACTAAGAATAAGGGCTCAAAAAAAAACCGTGCATCAAGCAGAGAGGCCCATTTGGTAGGGAACGATCGCGTGCCTACACCGGATGAAATTTTAGAGACGATTGTTCCCATTTCGTTCAACAGGGACGAATTTGATGAGATGGACAAGGAGGTTGAAGAGTATATGTTAAgtgatgaagatgacaatgGAGAACAACAGGATGTTTTAGGCAGTGTTTCAGGATCAAGTGGGCGTAGTAGTGCTAGTTCGAGTTCTTCTTCATCGTCTACCTCGAGCCAAAGCTCTAACTCTTCCACTCACTTAGAGTctttaaagaagaaaagaaaagaattgaatgATCAACTGGATTTTGTATTATATTTGAGACTTTTCAGTAAACCAAGTTCAAGGACAGCTGGATTCAGGCATGCAATTCGTTTGGACGCTAATCACTACCTTTCAACTGTATTGAAATCATACAGAGACGTAATATGA

Transcript

ENSSJYT00000006349

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7TSG2	RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus musculus OX=10090 GN=Ctdp1 PE=1 SV=1
Q9Y5B0	RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo sapiens OX=9606 GN=CTDP1 PE=1 SV=3
Q95QG8	RNA polymerase II subunit A C-terminal domain phosphatase OS=Caenorhabditis elegans OX=6239 GN=fcp-1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007068 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03031 all species →	NIF	NLI interacting factor-like phosphatase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004274 all species →	Domain	FCP1 homology domain	Interproscan
IPR001357 all species →	Domain	BRCT domain	Interproscan
IPR039189 all species →	Family	CTD phosphatase Fcp1	Interproscan
IPR036420 all species →	Homologous_superfamily	BRCT domain superfamily	Interproscan
IPR023214 all species →	Homologous_superfamily	HAD superfamily	Interproscan
IPR036412 all species →	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR011947 all species →	Domain	FCP1-like phosphatase, phosphatase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23081 all species →	RNA POLYMERASE II CTD PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008420 all species →	Molecular Function	RNA polymerase II CTD heptapeptide repeat phosphatase activity	Interproscan
GO:0070940 all species →	Biological Process	obsolete dephosphorylation of RNA polymerase II C-terminal domain	Interproscan
GO:0004721 all species →	Molecular Function	phosphoprotein phosphatase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000006094.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.