Genomic Location: not available for this species
NR annotation: XP_047124558.1, pre-mRNA-splicing factor PRP46 isoform X3 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families
| CDS |
| ENSSJYT00000006493 |
| Transcript |
| ENSSJYT00000006493 |
| Protein |
| ENSSJYP00000006223.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0012529 (this species only) |
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR045241 all species → | Family | WD repeat Prp46/PLRG1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19923 all species → | WD40 REPEAT PROTEINPRL1/PRL2-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000398 all species → | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0000974 all species → | Cellular Component | Prp19 complex | Interproscan |
| GO:0071011 all species → | Cellular Component | precatalytic spliceosome | Interproscan |
| GO:0071013 all species → | Cellular Component | catalytic step 2 spliceosome | Interproscan |
ENSSJYP00000006223.1.
