Gene detail

Detailed information of ENSSJYP00000006457.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047137146.1, flap endonuclease 1-like [Hydra vulgaris]
Species abbreviation CMOSA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A7RRJ0	Flap endonuclease 1 OS=Nematostella vectensis OX=45351 GN=FEN1 PE=3 SV=1
C3ZBT0	Flap endonuclease 1 OS=Branchiostoma floridae OX=7739 GN=FEN1 PE=3 SV=1
Q7Q323	Flap endonuclease 1 OS=Anopheles gambiae OX=7165 GN=Fen1 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003834 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00752 all species →	XPG_N	XPG N-terminal domain	Family	Interproscan
PF00867 all species →	XPG_I	XPG I-region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029060 all species →	Homologous_superfamily	PIN-like domain superfamily	Interproscan
IPR006085 all species →	Domain	XPG, N-terminal	Interproscan
IPR036279 all species →	Homologous_superfamily	5'-3' exonuclease, C-terminal domain superfamily	Interproscan
IPR008918 all species →	Conserved_site	Helix-hairpin-helix motif, class 2	Interproscan
IPR006086 all species →	Domain	XPG-I domain	Interproscan
IPR019974 all species →	Conserved_site	XPG conserved site	Interproscan
IPR006084 all species →	Family	XPG/Rad2 endonuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11081 all species →	FLAP ENDONUCLEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004518 all species →	Molecular Function	nuclease activity	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0016788 all species →	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004523 all species →	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008409 all species →	Molecular Function	5'-3' exonuclease activity	Interproscan
GO:0017108 all species →	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0030145 all species →	Molecular Function	manganese ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSSJYP00000006457.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.