Gene detail

Detailed information of ENSSJYP00000006608.1 in Catostylus mosaicus

Genomic Location: not available for this species
NR annotation: XP_047122527.1, ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1 [Hydra vulgaris]
Species Catostylus mosaicus · all data for this species · gene families

Sequence

CDS

Transcript

ENSSJYT00000006909

TCCGGGATCGAAGAAGCAAGATGGACTGATTGCAAGTCGAATTTTGCTACAGTTTGTTTAGCTGTCTGATAGTAGTTGTCTTTTTGATCTGCCTCAAATATGAGCTACCCTGGCAGCTACAGAGAGTGGAGAGAACTTGAAAGCGATCCAGGATTATTCACATTGCTAGTGGAAGACTTTGGTGTGAAAGGAGTTGAGGTGGAAGAAATCTATGACCTGAGCAAACCAATTGAAGGTCATGTTTATGGGTTGATATTCTTGTTCAAATGGACTGAAGAAAGAAGATCAAGAAGAAAAACTCCTGCAAAAGAagcatttattgaaaatgatgatatcgTAAATAACATGTTCTTTGCGCAACAGATCATCCCCAATTCATGTGCATCACACGCCCTTCTGAGTGTGCTTCTGAACTGTATGGATGCTGATATTGGAAAAGCGCTGAAAGAACTGAGGGATTCATGCAAAGGATTTGACCCAGAGaCCAAAGGATACGCGATTGGAAACGTGGTTGAAATAGCGGTGGCACATAACAAGCATGCAAGATCAGAGCTGAGGCTGCAGATTGACAAATCTAAGAATCTTGCATCCGCCAGTCGTGCTATGGAAGCGTTTCATTTTGTTAGCTTCATTGCTTACGAAGGCCGTCTCATTGAGCTCGATGGTCTCAAGCCGTACCCCATCGATCACGGCCCATGGTATGATCATGAAACGTGGTCTGATAAGGCAAGACAGGTTATTCAAGAGAAGATATCACTCGCAACTGCTGGAGACACGTCCCACGATATTCGGTATAATCTGATGGCGGTGGTTGCCGATCGTCAAATGGAATATGAGAAGAGGTTGGAGATGGTGAGGCATAACAGAAACGTCCTGATTgaagttttcaaaaagatggcCTCTAGCCTGACGTTTTCTCCTGAGCCGCCAAAGTCAggaattttaaagcaaaaccTGCCTGAAAACGAAATGCAAGGAATACCGGAAGAATTAATGCCGAATCGCAGTCCAAATAAAAAGGTAACATTCGCATTGCAGCAGATCTCAGCCTCGTCAAGTACTCGTTCGTCTACGATCACAGGCAACGAATCACCACAGCACCAATTATCGGATAACGAAAGTGATGTCGAGACCTACCGACTAAACTCGCTGCTTAGAGGTGAAATGAAGGGCCCGGTTTGCGTTTATAGTAGTGGGGACACTGAGGTGAAGACGAAAAGCCTTGCGGAAAGCATCGGTGTGGGAACCTCATCAACGAAAACTGAGAAAATTGAATCAACAGCTGCTGTTACACAGCCGGAAGCCACACCCGAAAACCGTACCGATTCGTCAGACAACTCGGGAGGATGTCGGACGGTCTCGGAAGAGCTGGCTAAATTCGCAGTTATTACAGTTCAGTCGCAATCGACCGAGAGTTTCTCGGCTGCTGTGAACACATTATACACTGATGCGAAAATAGACGACAAGCAATGGGCACCCAAACCTGAGAATGAAGGAAAATTTGGCACCAATATTTTAAAGGGTGGGAGAATGAATATTGGAGATTGGAAAAATGAGGATAATGCAGATTTTAGTAATGAAATGGAATCATCCGAGCAATTTGAAGGTGTCGTAAGAAAACGAAAGTTATCAGAAGATGATGTTCCTAAAGATTTCACGTTGAAGGACTTCCAAACAGTGATGCAAGATGTGGAATCGAATATAAAACAATCTCAAGCATCCTACAAAGACCAGAAGGATAAAAGAGAGAAACATAAgGTCGATGATTGTCGGCGTCGCCATAACTACGACCCTTTCATATCAACGTTCATGACGATGCTAGCTGAGCGAGGACTTTTGACAAAACTTCTCGAGCAAGAAAACTCGCTAATAAAAAGAATGTCGATCTCTTCAGCACACAGTGCCAACAAATCTCTCGACAAGAAGAACGCAAAGCGAAAGAGGAAAAGGTAATTTTGCATTTCGGTAACTCTAGACACCGGCCTTTCCAAAAGTTGTATTAAACCAAAACTTATTGGATTTTGATTAGCATAAAGTAACGCTACGGATCTTTAAAATGTCATTTCTACTTGTAATGAGTTTAAACGGACAAATTTTATGGGACATAATAGGACATGATGTCATAGTTTATGGGACAGAATCGAACATAAGATCTCGCGTTAAagattctgttttattttgaaatgtgtTGTGAAGCAGTGACTCAGAAAACATTcaacttttttgtaaatatgaatCTAAAATTAGTCAACAAGTATCTAAAAATCATCTTAAAACGAAgaa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5F3N6	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Gallus gallus OX=9031 GN=BAP1 PE=2 SV=1
C4A0D9	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Branchiostoma floridae OX=7739 GN=BAP1 PE=3 SV=1
Q92560	Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens OX=9606 GN=BAP1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004546 (this species only)
Ubiquitin family	DUB\|UCH\|UCH · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18031 all species →	UCH_C	Ubiquitin carboxyl-terminal hydrolases	Domain	Interproscan
PF01088 all species →	Peptidase_C12	Ubiquitin carboxyl-terminal hydrolase, family 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041507 all species →	Domain	Peptidase C12, C-terminal domain	Interproscan
IPR001578 all species →	Domain	Peptidase C12, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR036959 all species →	Homologous_superfamily	Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10589 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08588	BAP1, UCHL2; ubiquitin carboxyl-terminal hydrolase BAP1	EC:3.4.19.12	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.